[1] Laurent Noé and Donald E. K. Martin. A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels and k-Mer Distances. Journal of Computational Biology, 21(12):28, November 2014. [ bib | DOI | http | http ]
[2] Christophe Vroland, Mikael Salson, and Hélène Touzet. Lossless seeds for searching short patterns with high error rates. In International Workshop On Combinatorial Algorithms, Duluth, United States, October 2014. [ bib | http ]
[3] Amandine Perrin, Jean-Stéphane Varré, Samuel Blanquart, and Aïda Ouangraoua. ProCARs: Progressive Reconstruction of Ancestral Gene Orders. In ISCB-Latin America, Belo Horizonte, Brazil, October 2014. [ bib | http | http ]
[4] Azadeh Saffarian, Mathieu Giraud, and Hélène Touzet. Searching for alternate RNA structures in genomic sequences. In Computational Methods for Structural RNAs, CMSR'14, volume 1 of 1st workshop on Computational Methods for Structural RNAs, pages 13-24, Strasbourg, France, September 2014. [ bib | DOI | http | http ]
[5] Evguenia Kopylova, Laurent Noé, Pierre Pericard, Mikael Salson, and Helene Touzet. SortMeRNA 2: ribosomal RNA classification for taxonomic assignation. In Workshop on Recent Computational Advances in Metagenomics, ECCB 2014, Strasbourg, France, September 2014. [ bib | http ]
[6] Evguenia Kopylova, Laurent Noé, Pierre Pericard, and Helene Touzet. SortMeRNA 2: ribosomal RNA classification for taxonomic assignation . In Bioinformatics for Environmental Genomics, Lyon, France, May 2014. [ bib | http ]
[7] Martin Frith and Laurent Noé. Improved search heuristics find 20 000 new alignments between human and mouse genomes. Nucleic Acids Research, 42(7):e59, February 2014. [ bib | DOI | http ]
[8] Mathieu Giraud, Mikaël Salson, Marc Duez, Céline Villenet, Sabine Quief, Aurélie Caillault, Nathalie Grardel, Christophe Roumier, Claude Preudhomme, and Martin Figeac. Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing. BMC Genomics, 15(1):409, 2014. [ bib | DOI | http | http ]
[9] Robert Giegerich and Hélène Touzet. Modeling Dynamic Programming Problems over Sequences and Trees with Inverse Coupled Rewrite Systems. Algorithms, 7:62 - 144, 2014. [ bib | DOI | http | http ]
[10] Thibault Caradec, Maude Pupin, Aurélien Vanvlassenbroeck, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Philippe Jacques, and Valérie Leclère. Prediction of Monomer Isomery in Florine: A Workflow Dedicated to Nonribosomal Peptide Discovery. PLoS ONE, 9(1):e85667, January 2014. [ bib | DOI | http | http ]
[11] Ammar Abdo, Valérie Leclère, Philippe Jacques, Naomie Salim, and Maude Pupin. Prediction of New Bioactive Molecules using a Bayesian Belief Network. Journal of Chemical Information and Modeling, 54(1):30-36, January 2014. [ bib | DOI | http ]
[12] Bernd Reisinger, Josef Sperl, Alexandra Holinski, Veronika Schmid, Chitra Rajendran, Linn Carstensen, Sandra Schlee, Samuel Blanquart, Rainer Merkl, and Reinhard Sterner. Evidence for the Existence of Elaborate Enzyme Complexes in the Paleoarchean Era. Journal of the American Chemical Society, pages 122-9, January 2014. [ bib | DOI | http | http ]