2015.bib

@comment{{This file has been generated by bib2bib 1.98}}
@comment{{Command line: bib2bib -oc cite2015 -ob 2015.bib 2015.bib}}
@inproceedings{guigon:hal-01247604,
  title = {{Finding and analysing microRNAs in plant genomes with miRkwood}},
  author = {Guigon, Isabelle and Legrand, Sylvain and Berthelot, Jean-Frédéric and Benmounah, Mohcen and Touzet, Helene},
  booktitle = {{JOBIM 2015}},
  address = {Clermont-Ferrand, France},
  year = {2015},
  month = jul,
  url = {https://hal.archives-ouvertes.fr/hal-01247604},
  hal_id = {hal-01247604},
  hal_version = {v1},
  x-proceedings = {no},
  x-international-audience = {no},
  x-editorial-board = {yes},
  x-invited-conference = {no},
  x-scientific-popularization = {no}
}
@article{martin:hal-01237045,
  title = {{Faster exact distributions of pattern statistics through sequential elimination of states}},
  author = {Martin, Donald E. K. and Noé, Laurent},
  journal = {{Annals of the Institute of Statistical Mathematics}},
  publisher = {{Springer Verlag}},
  year = {2015},
  month = sep,
  doi = {10.1007/s10463-015-0540-y},
  url = {https://hal.inria.fr/hal-01237045},
  hal_id = {hal-01237045},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@article{pupin:hal-01250614,
  title = {{Norine: a powerful resource for novel nonribosomal peptide discovery}},
  author = {Pupin, Maude and Esmaeel, Qassim and Flissi, Areski and Dufresne, Yoann and Jacques, Philippe and Leclère, Valérie},
  journal = {{Synthetic and Systems Biotechnology}},
  publisher = {{KeAi}},
  year = {2015},
  month = dec,
  doi = {10.1016/j.synbio.2015.11.001},
  url = {https://hal.inria.fr/hal-01250614},
  pdf = {https://hal.inria.fr/hal-01250614/document},
  hal_id = {hal-01250614},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@article{dufresne:hal-01250619,
  title = {{Smiles2Monomers: a link between chemical and biological structures for polymers}},
  author = {Dufresne, Yoann and Noé, Laurent and Leclère, Valérie and Pupin, Maude},
  journal = {{Journal of Cheminformatics}},
  year = {2015},
  month = dec,
  doi = {10.1186/s13321-015-0111-5},
  url = {https://hal.inria.fr/hal-01250619},
  pdf = {https://hal.inria.fr/hal-01250619/document},
  hal_id = {hal-01250619},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@proceedings{touzet:hal-01228138,
  title = {{Algorithms for bioinformatics}},
  author = {Touzet, Hélène},
  booktitle = {{WABI}},
  address = {Atlanta, United States},
  organization = {{S. Aluru}},
  editor = {Mihai Pop and Hélène Touzet},
  publisher = {{Springer Verlag}},
  series = {15th International Workshop, WABI 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
  number = {9289},
  year = {2015},
  month = sep,
  doi = {10.1007/978-3-662-48221-6},
  url = {https://hal.archives-ouvertes.fr/hal-01228138},
  hal_id = {hal-01228138},
  hal_version = {v1},
  x-proceedings = {yes},
  x-international-audience = {yes},
  x-scientific-popularization = {no}
}
@article{perrin:hal-01217311,
  title = {{ProCARs: Progressive Reconstruction of Ancestral Gene Orders}},
  author = {Perrin, Amandine and Varré, Jean-Stéphane and Blanquart, Samuel and Ouangraoua, Aïda},
  journal = {{BMC Genomics}},
  publisher = {{BioMed Central}},
  volume = {16},
  number = {Suppl 5},
  pages = {S6},
  year = {2015},
  doi = {10.1186/1471-2164-16-S5-S6},
  url = {https://hal.inria.fr/hal-01217311},
  pdf = {https://hal.inria.fr/hal-01217311/document},
  hal_id = {hal-01217311},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@inproceedings{tran:hal-01153893,
  title = {{Perfect Hashing Structures for Parallel Similarity Searches}},
  author = {Tran, Tuan Tu and Giraud, Mathieu and Varré, Jean-Stéphane},
  booktitle = {{International Workshop on High Performance Computational Biology (HiCOMB 2015) / International Parallel and Distributed Processing Symposium (IPDPS 2015)}},
  address = {Hyderabad, India},
  pages = {332-341},
  year = {2015},
  doi = {10.1109/IPDPSW.2015.105},
  url = {https://hal.inria.fr/hal-01153893},
  hal_id = {hal-01153893},
  hal_version = {v1},
  x-proceedings = {yes},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-invited-conference = {yes},
  x-scientific-popularization = {no}
}
@inproceedings{sahlin:hal-01236176,
  title = {{Genome scaffolding with PE-contaminated mate-pair libraries}},
  author = {Sahlin, Kristoffer and Chikhi, Rayan and Arvestad., Lars},
  booktitle = {{WABI 2015}},
  address = {Atlanta, United States},
  year = {2015},
  doi = {10.1101/025650},
  url = {https://hal.archives-ouvertes.fr/hal-01236176},
  url = {http://biorxiv.org/content/early/2015/08/28/025650},
  hal_id = {hal-01236176},
  hal_version = {v1},
  x-proceedings = {yes},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-invited-conference = {no},
  x-scientific-popularization = {no}
}
@article{saffarian:hal-01228130,
  title = {{Modeling alternate RNA structures in genomic sequences.}},
  author = {Saffarian, Azadeh and Giraud, Mathieu and Touzet, Hélène},
  journal = {{Journal of Computational Biology}},
  volume = {22},
  number = {3},
  pages = {190-204},
  year = {2015},
  month = feb,
  url = {https://hal.archives-ouvertes.fr/hal-01228130},
  doi = {10.1089/cmb.2014.0272},
  hal_id = {hal-01228130},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@article{flissi:hal-01235996,
  title = {{Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing}},
  author = {Flissi, Areski and Dufresne, Yoann and Michalik, Juraj and Tonon, Laurie and Janot, Stéphane and Noé, Laurent and Jacques, Philippe and Leclère, Valérie and Pupin, Maude},
  journal = {{Nucleic Acids Research}},
  publisher = {{Oxford University Press}},
  year = {2015},
  doi = {10.1093/nar/gkv1143},
  url = {https://hal.archives-ouvertes.fr/hal-01235996},
  pdf = {https://hal.archives-ouvertes.fr/hal-01235996/document},
  hal_id = {hal-01235996},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@article{kotrova:hal-01241663,
  title = {{The predictive strength of next-generation sequencing MRD detection for relapse compared with current methods in childhood ALL.}},
  author = {Kotrova, Michaela and Muzikova, Katerina and Mejstrikova, Ester and Novakova, Michaela and Bakardjieva-Mihaylova, Violeta and Fiser, Karel and Stuchly, Jan and Giraud, Mathieu and Salson, Mikael and Pott, Christiane and Brüggemann, Monika and Füllgrabe, Marc and Stary, Jan and Trka, Jan and Fronkova, Eva},
  journal = {{Blood}},
  publisher = {{American Society of Hematology}},
  volume = {126},
  number = {8},
  pages = {1045-7},
  year = {2015},
  month = aug,
  doi = {10.1182/blood-2015-07-655159},
  url = {https://hal.archives-ouvertes.fr/hal-01241663},
  hal_id = {hal-01241663},
  hal_version = {v1},
  x-international-audience = {yes},
  x-editorial-board = {yes},
  x-scientific-popularization = {no}
}
@incollection{kopylova:hal-01104015,
  title = {{Deciphering metatranscriptomic data}},
  author = {Kopylova, Evguenia and Noé, Laurent and Da Silva, Corinne and Berthelot, Jean-Frédéric and Alberti, Adriana A. and Aury, Jean-Marc and Touzet, Helene},
  booktitle = {{Methods in Molecular Biology}},
  publisher = {{Springer}},
  series = {RNA Bioinformatics},
  volume = {1269},
  pages = {279-291},
  year = {2015},
  month = jan,
  doi = {10.1007/978-1-4939-2291-8\_17},
  url = {https://hal.inria.fr/hal-01104015},
  hal_id = {hal-01104015},
  hal_version = {v1},
  x-international-audience = {yes},
  x-scientific-popularization = {no}
}

This file was generated by bibtex2html 1.98.