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The Download link provides BLAST output that may be used as input to another program. This includes parseable formats such as the tabular report or XML as well as the Search Strategy files read by the BLAST+ applications. More details on the parseable (XML, tabular, and ASN.1) reports can be found at http://www.ncbi.nlm.nih.gov/books/NBK21097/

The following formats are offered under the Alignment section:
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2). "XML". XML report based upon the DTD at http://www.ncbi.nlm.nih.gov/data_specs/dtd/NCBI_BlastOutput.dtd
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The following report is offered under the Search Strategy section:
1). "ASN.1" Search Strategy. A record of the parameters, query, and database used in the search. This file can be used to start a stand-alone BLAST search, see http://www.ncbi.nlm.nih.gov/books/NBK1763/#CmdLineAppsManual.I455_BLAST_search_stra
emb|CADV01009238| (23971 letters)

Query ID: gi|351002772|emb|CADV01009238.1|; gi|351002772|emb|CADV01009238.1|
Description: Bursaphelenchus xylophilus, WGS project CADV00000000 data, strain Ka4C1 (inbred line), scaffold01254.114
Molecule type: dna
Query Length: .....
Database Name: nr
Description: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects See details
Program: BLAST 2.2.27+ Citation
Other reports: Search Summary
Search Parameters
Search parameter name	Search parameter value
Program	blast
Word size	3
Expect value	10
Hitlist size	100
Gapcosts	11,1
Matrix	BLOSUM62
Low Complexity Filter	Yes
Filter string	L;
Genetic Code	1
Window Size	40
Threshold	12
Composition-based stats	2
Database
Database parameter name	Database parameter value
Posted date	Dec 4, 2012 2:20 PM
Number of letters	7,494,993,772
Number of sequences	21,834,768
Entrez query	none
Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.317606	0.267
K	0.133956	0.041
H	0.401215	0.14
Alpha	0.7916	1.9
Alpha_v	4.96466	42.6028
Sigma		43.6362
Descriptions

Legend for links to other resources:
UniGene
GEO
Gene
Structure
Map Viewer
PubChem BioAssay
Sequences producing significant alignments:
Accession	Description	Max score	Total score	Query coverage	E value	Max ident
ADY41274.1	Acetylcholine receptor subunit alpha-type deg-3 [Ascaris suum]	184	674	6%	6e-84	87%
EGT54975.1	hypothetical protein CAEBREN_31814 [Caenorhabditis brenneri]	180	610	6%	8e-76	88%
XP_002636518.1	C. briggsae CBR-DEG-3 protein [Caenorhabditis briggsae]	177	627	6%	2e-72	85%
EJW88494.1	hypothetical protein WUBG_00597 [Wuchereria bancrofti]	135	533	6%	9e-62	68%
XP_002636519.1	C. briggsae CBR-DES-2 protein [Caenorhabditis briggsae]	234	740	8%	3e-61	82%
EGT46511.1	CBN-DES-2 protein [Caenorhabditis brenneri]	234	741	8%	4e-61	82%
XP_003101739.1	CRE-DES-2 protein [Caenorhabditis remanei] >gb\|EFP06903.1\| CRE-DES-2 protein [Caenorhabditis remanei]	234	740	8%	6e-61	82%
NP_001256320.1	Protein DES-2, isoform a [Caenorhabditis elegans] >sp\|O76554.1\|ACH4_CAEEL RecName: Full=Acetylcholine receptor subunit alpha-type des-2; Flags: Precursor >gb\|AAC98095.1\| acetyl choline receptor alpha subunit DES-2 [Caenorhabditis elegans] >emb\|CAA98550.1\| Protein DES-2, isoform a [Caenorhabditis elegans]	232	739	8%	2e-60	81%
NP_001256321.1	Protein DES-2, isoform b [Caenorhabditis elegans] >emb\|CCG28066.1\| Protein DES-2, isoform b [Caenorhabditis elegans]	232	739	8%	2e-60	81%
ACO48379.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	213	570	6%	5e-57	78%
ACO48389.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus] >gb\|ACO48390.1\| acetylcholine receptor DES-2-like protein [Haemonchus contortus]	213	575	6%	5e-57	78%
ACO48383.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	213	575	6%	6e-57	78%
ACO48382.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	213	573	6%	6e-57	78%
ADN33426.1	ACR-24-like protein [Haemonchus contortus] >gb\|ADN33427.1\| ACR-24-like protein [Haemonchus contortus]	132	571	6%	1e-56	64%
ADN33425.1	ACR-24-like protein [Haemonchus contortus]	132	567	6%	1e-56	63%
NP_001255866.1	Protein ACR-24, isoform a [Caenorhabditis elegans] >emb\|CCE71913.1\| Protein ACR-24, isoform a [Caenorhabditis elegans]	130	531	6%	4e-56	66%
NP_001255865.1	Protein ACR-24, isoform b [Caenorhabditis elegans] >emb\|CCE71912.1\| Protein ACR-24, isoform b [Caenorhabditis elegans]	130	531	6%	4e-56	66%
ACO48380.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	209	567	6%	5e-56	77%
ACO48361.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	218	767	10%	8e-56	73%
ACO48365.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	767	10%	1e-55	78%
ACO48364.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	768	10%	1e-55	78%
ACO48366.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	766	10%	1e-55	78%
ACO48374.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	766	10%	1e-55	78%
ACO48372.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	760	10%	2e-55	78%
ACO48369.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	760	10%	2e-55	78%
ACO48381.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	208	568	6%	2e-55	76%
ACO48377.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	763	10%	3e-55	78%
ACO48375.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	764	10%	3e-55	78%
ACO48368.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	764	10%	3e-55	78%
ACO48371.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	764	10%	3e-55	78%
ACO48367.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	764	10%	3e-55	78%
ACO48360.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	765	10%	3e-55	78%
ACO48370.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	216	764	10%	4e-55	78%
ACO48376.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	764	10%	4e-55	78%
ACO48378.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	215	766	10%	4e-55	78%
ACO48363.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	214	767	10%	1e-54	77%
ACO48362.1	acetylcholine receptor DES-2-like protein [Haemonchus contortus]	211	761	10%	1e-53	77%
XP_003088117.1	hypothetical protein CRE_14434 [Caenorhabditis remanei] >gb\|EFO93464.1\| hypothetical protein CRE_14434 [Caenorhabditis remanei]	130	402	4%	2e-53	58%
XP_002632479.1	C. briggsae CBR-ACR-24 protein [Caenorhabditis briggsae]	124	504	5%	6e-50	66%
XP_001900294.1	Neurotransmitter-gated ion-channel transmembrane region family protein [Brugia malayi] >gb\|EDP31044.1\| Neurotransmitter-gated ion-channel transmembrane region family protein [Brugia malayi]	131	440	4%	2e-46	93%
XP_003089069.1	hypothetical protein CRE_21070 [Caenorhabditis remanei] >gb\|EFO87378.1\| hypothetical protein CRE_21070 [Caenorhabditis remanei]	126	713	5%	1e-45	71%
ACO48397.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	645	6%	1e-44	78%
ACO48401.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	1e-44	78%
ACO48403.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	2e-44	78%
ACO48399.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	643	6%	2e-44	78%
ACO48398.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	2e-44	78%
ACO48393.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	2e-44	78%
ACO48396.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	2e-44	78%
ACO48394.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	644	6%	2e-44	78%
ACO48402.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	641	6%	2e-44	78%
ACO48395.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	184	643	6%	3e-44	78%
NP_001022273.1	Protein ACR-20, isoform b [Caenorhabditis elegans] >emb\|CAE46678.2\| Protein ACR-20, isoform b [Caenorhabditis elegans]	182	445	5%	3e-44	64%
NP_001022272.1	Protein ACR-20, isoform a [Caenorhabditis elegans] >emb\|CAB51466.2\| Protein ACR-20, isoform a [Caenorhabditis elegans]	182	445	5%	3e-44	64%
XP_002646655.1	C. briggsae CBR-ACR-20 protein [Caenorhabditis briggsae]	182	447	4%	4e-44	79%
XP_003104256.1	CRE-ACR-20 protein [Caenorhabditis remanei] >gb\|EFP02178.1\| CRE-ACR-20 protein [Caenorhabditis remanei]	180	452	5%	4e-44	79%
NP_001122627.1	Protein ACR-20, isoform c [Caenorhabditis elegans] >emb\|CAQ16152.1\| Protein ACR-20, isoform c [Caenorhabditis elegans]	182	450	5%	4e-44	79%
ACO48400.1	acetylcholine receptor DEG-3-like protein [Haemonchus contortus]	182	640	6%	5e-44	76%
AAR98637.1	acetylcholine receptor 20 (63.9 kD) alternative variant a [Caenorhabditis elegans]	182	447	5%	5e-44	79%
XP_003088116.1	hypothetical protein CRE_14433 [Caenorhabditis remanei] >gb\|EFO93463.1\| hypothetical protein CRE_14433 [Caenorhabditis remanei]	127	335	3%	8e-44	58%
XP_003101666.1	CRE-DEG-3 protein [Caenorhabditis remanei] >gb\|EFP06830.1\| CRE-DEG-3 protein [Caenorhabditis remanei]	177	642	6%	2e-42	85%
NP_505897.1	Protein DEG-3 [Caenorhabditis elegans] >sp\|P54244.1\|ACH3_CAEEL RecName: Full=Acetylcholine receptor subunit alpha-type deg-3; Flags: Precursor >gb\|AAA92688.1\| nicotinic acetylcholine receptor alpha subunit [Caenorhabditis elegans] >gb\|AAA92689.1\| nicotinic acetylcholine receptor alpha subunit precursor [Caenorhabditis elegans] >emb\|CAA98507.1\| Protein DEG-3 [Caenorhabditis elegans]	177	644	6%	3e-42	85%
EGT46514.1	CBN-DEG-3 protein [Caenorhabditis brenneri]	177	640	6%	2e-42	85%
ADN33420.1	ACR-5-like protein [Haemonchus contortus]	108	455	6%	2e-20	61%
ADN33421.1	ACR-5-like protein [Haemonchus contortus]	107	453	6%	5e-20	61%
ACO48373.1	mutant acetylcholine receptor DES-2-like protein [Haemonchus contortus]	166	383	3%	3e-42	82%
XP_002641021.1	C. briggsae CBR-ACR-5 protein [Caenorhabditis briggsae]	121	452	6%	2e-24	57%
ACO48337.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	166	396	4%	5e-41	60%
ACO48336.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	166	392	4%	7e-41	60%
EGT54971.1	hypothetical protein CAEBREN_30784 [Caenorhabditis brenneri]	172	647	8%	1e-40	65%
XP_003093420.1	CRE-ACR-5 protein [Caenorhabditis remanei] >gb\|EFO94159.1\| CRE-ACR-5 protein [Caenorhabditis remanei]	121	458	6%	2e-24	57%
ACN56910.1	mutant ACR-23-like protein [Haemonchus contortus]	162	378	4%	3e-40	60%
EGT54700.1	hypothetical protein CAEBREN_30303 [Caenorhabditis brenneri]	123	453	6%	7e-25	57%
ACO48356.1	mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	468	5%	1e-39	79%
ACO48355.1	mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	484	6%	1e-39	79%
ACO48357.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	460	6%	1e-39	62%
ACO48354.1	mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	486	6%	2e-39	79%
ACN56912.1	mutant ACR-23-like protein [Haemonchus contortus]	166	487	6%	2e-39	79%
EJW88493.1	acetylcholine receptor subunit alpha-type des-2 [Wuchereria bancrofti]	166	550	9%	3e-39	61%
ACO48333.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	488	6%	3e-39	79%
ACO48331.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	481	6%	3e-39	79%
ACN56909.1	ACR-23-like protein [Haemonchus contortus] >gb\|ACO48329.1\| acetylcholine receptor monepantel-1 [Haemonchus contortus] >gb\|ACO48334.1\| acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	488	6%	3e-39	79%
ACO48330.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	487	6%	4e-39	79%
ACO48353.1	mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]	165	488	6%	4e-39	79%
ACO48335.1	acetylcholine receptor monepantel-1 [Haemonchus contortus]	167	486	6%	7e-39	79%
ACN56913.1	ACR-23-like protein [Haemonchus contortus] >gb\|ACO48332.1\| acetylcholine receptor monepantel-1 [Haemonchus contortus]	164	480	6%	7e-38	79%
AAR98638.1	acetylcholine receptor alternative variant b [Caenorhabditis elegans]	158	340	3%	1e-36	79%
NP_498437.2	Protein ACR-5 [Caenorhabditis elegans] >sp\|P54246.4\|ACR5_CAEEL RecName: Full=Acetylcholine receptor subunit alpha-type acr-5; Flags: Precursor >emb\|CCD63926.1\| Protein ACR-5 [Caenorhabditis elegans]	107	427	6%	2e-36	61%
XP_003115414.1	CRE-ACR-23 protein [Caenorhabditis remanei] >gb\|EFO99901.1\| CRE-ACR-23 protein [Caenorhabditis remanei]	152	459	6%	4e-34	64%
EGT56973.1	hypothetical protein CAEBREN_09028 [Caenorhabditis brenneri]	149	427	6%	2e-33	64%
EGT38487.1	hypothetical protein CAEBREN_00067 [Caenorhabditis brenneri]	148	456	6%	4e-33	64%
NP_504024.2	Protein ACR-23 [Caenorhabditis elegans] >gb\|AAR89634.1\| acetylcholine receptor (62.5 kD) (acr-23) [Caenorhabditis elegans] >emb\|CCD72123.1\| Protein ACR-23 [Caenorhabditis elegans]	147	446	6%	1e-32	57%
XP_003095532.1	hypothetical protein CRE_17510 [Caenorhabditis remanei] >gb\|EFO89146.1\| hypothetical protein CRE_17510 [Caenorhabditis remanei]	130	534	6%	2e-27	66%
EGT42046.1	CBN-ACR-24 protein [Caenorhabditis brenneri]	130	534	6%	2e-27	66%
XP_003089071.1	hypothetical protein CRE_21069 [Caenorhabditis remanei] >gb\|EFO87380.1\| hypothetical protein CRE_21069 [Caenorhabditis remanei]	105	154	2%	3e-27	66%
XP_003089007.1	hypothetical protein CRE_22231 [Caenorhabditis remanei] >gb\|EFO87530.1\| hypothetical protein CRE_22231 [Caenorhabditis remanei]	104	374	4%	8e-24	68%
XP_002648071.1	Hypothetical protein CBG24089 [Caenorhabditis briggsae]	120	120	1%	3e-25	58%
XP_003088467.1	hypothetical protein CRE_30609 [Caenorhabditis remanei] >gb\|EFO91139.1\| hypothetical protein CRE_30609 [Caenorhabditis remanei]	116	373	4%	4e-25	71%
ACN56914.1	mutant ACR-23-like protein [Haemonchus contortus] >gb\|ACO48359.1\| mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]	114	192	2%	2e-24	64%
XP_003089733.1	hypothetical protein CRE_17673 [Caenorhabditis remanei] >gb\|EFP13073.1\| hypothetical protein CRE_17673 [Caenorhabditis remanei]	103	326	4%	2e-23	68%
ADN33419.1	ACR-5-like protein [Haemonchus contortus]	105	442	6%	2e-19	61%
Alignments

Select All Get selected sequences

>gb|ADY41274.1|  Acetylcholine receptor subunit alpha-type deg-3 [Ascaris suum]
Length=612


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (468),  Expect(2) = 6e-84, Method: Compositional matrix adjust.
 Identities = 82/103 (80%), Positives = 94/103 (91%), Gaps = 0/103 (0%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM+ DETERYMN++  + +WEG+ G+++SFLYPAIYTVTCRLN+RYFPYDQQNCT
Sbjct  162   LYNSVVMSRDETERYMNVQVASRYWEGKPGANMSFLYPAIYTVTCRLNVRYFPYDQQNCT  221

Query  4114  LTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHE  3986
             LTISSWTNSKSALDYYAD  VNM SFIPNEEW V+SFKV+RHE
Sbjct  222   LTISSWTNSKSALDYYADESVNMQSFIPNEEWDVMSFKVYRHE  264


 Score =   158 bits (400),  Expect(2) = 6e-84, Method: Compositional matrix adjust.
 Identities = 73/108 (68%), Positives = 88/108 (81%), Gaps = 5/108 (5%)
 Frame = -3

Query  4670  DPRDGLKH-----DQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVN  4506
             D  +G+ H       VP VRLTRD+L   RYD+RVRP+ NHS PLKI+ISMSLYQ+IDVN
Sbjct  55    DDANGVHHFPFAYQDVPLVRLTRDLLAKERYDVRVRPISNHSAPLKIHISMSLYQIIDVN  114

Query  4505  EPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             EPSQ I+MNMWMIQKW DEMLDW+P++Y MIN+TILPH+ +WIPDTY+
Sbjct  115   EPSQNIKMNMWMIQKWSDEMLDWNPQEYGMINSTILPHSSLWIPDTYL  162


 Score =   126 bits (317),  Expect(2) = 8e-43, Method: Compositional matrix adjust.
 Identities = 59/68 (87%), Positives = 66/68 (97%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              +YKYACC EPWVI+EAS+VIRRKPLYYVVNLIIPTSIIT+VSITGFFTPAST+DDRTEK
Sbjct  263   HEYKYACCSEPWVIIEASLVIRRKPLYYVVNLIIPTSIITIVSITGFFTPASTSDDRTEK  322

Query  2688  INLGITTV  2665
             I+LGITT+
Sbjct  323   IDLGITTL  330


 Score = 79.3 bits (194),  Expect(2) = 8e-43, Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 13/92 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTS++LS+QGRR++GK+P
Sbjct  342   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSIVLSVQGRRKFGKMP  388

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELH  2309
                VR  FF     W C+ VP  L  LW+EL+
Sbjct  389   TEIVRVVFFVYIAHWMCLSVPSQLLQLWDELN  420


 Score =   125 bits (313),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 79/126 (63%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W+DE L WNP +YG I    LPH  +W+PDT LYNS+VM  D+T R +N ++ +     
Sbjct  129    KWSDEMLDWNPQEYGMINSTILPHSSLWIPDTYLYNSVVMSRDETERYMNVQVASRYWEG  188

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
              +  A +  LYP IY  +C LN+RYFP+D Q CT+T SSWT  +  +DY A  E +   +F
Sbjct  189    KPGANMSFLYPAIYTVTCRLNVRYFPYDQQNCTLTISSWTNSKSALDYYA-DESVNMQSF  247

Query  10945  IENEGW  10928
              I NE W
Sbjct  248    IPNEEW  253


>gb|EGT54975.1|  hypothetical protein CAEBREN_31814 [Caenorhabditis brenneri]
Length=419


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   180 bits (456),  Expect(2) = 8e-76, Method: Compositional matrix adjust.
 Identities = 80/105 (76%), Positives = 95/105 (90%), Gaps = 0/105 (0%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSV M+ DETERYMNI+  + +W+G +GS +SFLYPAIYT+TCRLNIR+FPYD+QNCT
Sbjct  141   LYNSVKMSRDETERYMNIQVTSNYWKGEKGSELSFLYPAIYTITCRLNIRFFPYDRQNCT  200

Query  4114  LTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHEVS  3980
             LTISSWTNSKSALDYYADP+V+M SFIPNEEW+V SF++ RHEVS
Sbjct  201   LTISSWTNSKSALDYYADPQVSMQSFIPNEEWQVKSFEIHRHEVS  245


 Score =   136 bits (342),  Expect(2) = 8e-76, Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 98/145 (68%), Gaps = 12/145 (8%)
 Frame = -3

Query  4775  NLSVALGVLPLQNIFRKQSLVKIFNNFFNLPASSADPR-------DGLKHDQVPQVRLTR  4617
              L V++ +L L  I      V I ++  N    + DPR         +    VP +RLTR
Sbjct  2     TLKVSITILLLSVI-----TVTISSHSLNATLKTFDPRLLNSTADRDIAMQNVPLIRLTR  56

Query  4616  DILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDW  4437
              +L P RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EPSQ I++N+WMIQKW+DE LDW
Sbjct  57    HLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEPSQNIKLNVWMIQKWKDEYLDW  116

Query  4436  DPRDYSMINTTILPHNVIWIPDTYV  4362
             +P ++ MIN+TI+P + +WIPDTY+
Sbjct  117   NPNEFGMINSTIIPFHHLWIPDTYL  141


 Score =   128 bits (322),  Expect(2) = 3e-33, Method: Compositional matrix adjust.
 Identities = 60/68 (88%), Positives = 66/68 (97%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
             FQYKYACC EPWVIL+AS+VI+RKPLYY+VNLIIPTSIITLV+ITGFFTPAST DDRTEK
Sbjct  259   FQYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEK  318

Query  2688  INLGITTV  2665
             INLGITT+
Sbjct  319   INLGITTL  326


 Score = 45.8 bits (107),  Expect(2) = 3e-33, Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 40/55 (73%), Gaps = 13/55 (24%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQ  2420
             DQMPTTS+F+PLI              WFYLSIIIIISIGTFLTSV+LS+QGRR 
Sbjct  338   DQMPTTSEFVPLIA-------------WFYLSIIIIISIGTFLTSVVLSVQGRRH  379


 Score =   119 bits (299),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 54/126 (43%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L WNP ++G I    +P H +W+PDT LYNS+ M  D+T R +N ++T+N    
Sbjct  108    KWKDEYLDWNPNEFGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKG  167

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT  +  +DY A   ++   +F
Sbjct  168    EKGSELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA-DPQVSMQSF  226

Query  10945  IENEGW  10928
              I NE W
Sbjct  227    IPNEEW  232


>ref|XP_002636518.1|  C. briggsae CBR-DEG-3 protein [Caenorhabditis briggsae]
Length=563

 GENE ID: 8578513 Cbr-deg-3 | C. briggsae CBR-DEG-3 protein
[Caenorhabditis briggsae] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   177 bits (450),  Expect(2) = 2e-72, Method: Compositional matrix adjust.
 Identities = 78/103 (76%), Positives = 93/103 (90%), Gaps = 0/103 (0%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSV M+ DETERYMNI+  + +W+G +GS +SFLYPAIYT+TCRLNIR+FPYD+QNCT
Sbjct  140   LYNSVKMSRDETERYMNIQVTSNYWKGEKGSELSFLYPAIYTITCRLNIRFFPYDRQNCT  199

Query  4114  LTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHE  3986
             LTISSWTNSKSALDYYADP+V+M SFIPNEEW+V SF++ RHE
Sbjct  200   LTISSWTNSKSALDYYADPQVSMQSFIPNEEWQVKSFEIHRHE  242


 Score =   127 bits (319),  Expect(2) = 2e-72, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 3/106 (3%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+AD RD +    VP +RLTR +L P RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EP
Sbjct  38    STAD-RD-IAMQNVPLIRLTRHLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEP  95

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             SQ I++N+WMIQKW+DE LDW+P ++ M N+TI+P + +WIPDTY+
Sbjct  96    SQNIKLNVWMIQKWKDEYLDWNPNEFGM-NSTIIPFHHLWIPDTYL  140


 Score =   124 bits (311),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              +YKYACC EPWVIL+AS+VI+RKPLYY+VNLIIPTSIITLV+ITGFFTPAST DDRTEK
Sbjct  241   HEYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEK  300

Query  2688  INLGITTV  2665
             INLGITT+
Sbjct  301   INLGITTL  308


 Score = 82.8 bits (203),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIIIISIGTFLTSV+LS+QGRRQYG+ P
Sbjct  320   DQMPTTSEFVPLIA-------------WFYLSIIIIISIGTFLTSVVLSVQGRRQYGRNP  366

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P ++RY FF        + VPPPL  LW EL
Sbjct  367   PQFIRYIFFVILPQVLLLNVPPPLQTLWGEL  397


 Score =   115 bits (287),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L WNP ++G +    +P H +W+PDT LYNS+ M  D+T R +N ++T+N    
Sbjct  108    KWKDEYLDWNPNEFG-MNSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKG  166

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT  +  +DY A   ++   +F
Sbjct  167    EKGSELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA-DPQVSMQSF  225

Query  10945  IENEGWYL  10922
              I NE W +
Sbjct  226    IPNEEWQV  233


>gb|EJW88494.1|  hypothetical protein WUBG_00597 [Wuchereria bancrofti]
Length=473


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   135 bits (339),  Expect(2) = 9e-62, Method: Compositional matrix adjust.
 Identities = 58/102 (57%), Positives = 80/102 (78%), Gaps = 1/102 (1%)
 Frame = -3

Query  4652  KHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMW  4473
             +  Q+P +RL RD+L   RYD  VRPV N+S+ L ++ISMSLYQ++DV+EPSQ++ +N+W
Sbjct  37    ERQQLPHIRLVRDLLSTKRYDPSVRPVGNYSKSLTVHISMSLYQVVDVDEPSQYLTLNIW  96

Query  4472  MIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYVSLGRH  4347
             MIQKW DE LDW+P +Y MIN T+LPH+ +WIPDT++   RH
Sbjct  97    MIQKWVDEFLDWNPSEYDMINYTVLPHSALWIPDTFI-YNRH  137


 Score =   134 bits (337),  Expect(2) = 9e-62, Method: Compositional matrix adjust.
 Identities = 55/99 (56%), Positives = 77/99 (78%), Gaps = 0/99 (0%)
 Frame = -1

Query  4282  VVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCTLTIS  4103
             VVM+ + +ERYMN+   +  W+ + G+ + FLYPA+YT+ CR++IRYFPYD QNCTLT+ 
Sbjct  142   VVMSREGSERYMNVAVKSRHWKDKCGAEVFFLYPALYTIRCRIDIRYFPYDHQNCTLTLG  201

Query  4102  SWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHE  3986
             SWT+SK+ L+Y  D  VNM S+IPNEEW ++SF ++RHE
Sbjct  202   SWTSSKALLNYTTDKAVNMHSYIPNEEWDILSFNLYRHE  240


 Score =   110 bits (276),  Expect(2) = 3e-32, Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 65/76 (86%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             I  F+L+  +Y YACC +PWVI+E S++IRRKPLYYVVNLIIPT+I+TLV+I GFFTPAS
Sbjct  231   ILSFNLYRHEYLYACCQDPWVIIEGSLIIRRKPLYYVVNLIIPTTILTLVAIVGFFTPAS  290

Query  2712  TADDRTEKINLGITTV  2665
             T D+RTEKI +GIT +
Sbjct  291   TNDERTEKITIGITAL  306


 Score = 60.1 bits (144),  Expect(2) = 3e-32, Method: Compositional matrix adjust.
 Identities = 42/98 (43%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTSDF+PLI              WFYLS II+IS  TF T  +L I G  + GK+P
Sbjct  318   DQMPTTSDFVPLIA-------------WFYLSNIIVISTATFCTCTVLCIHGHHKNGKLP  364

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWE--ELHVSQK  2297
             P+ +R  FF     + C+  P  L +LW   E +V Q+
Sbjct  365   PVLIRILFFKYICNYLCISPPCELIMLWSGREENVLQR  402


 Score = 93.2 bits (230),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (55%), Gaps = 8/131 (6%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNS-----LVMKDDDTRRLLNAKLTT  11135
              +W DEFL WNP +Y  I    LPH  +W+PDT +YN      +VM  + + R +N  + +
Sbjct  100    KWVDEFLDWNPSEYDMINYTVLPHSALWIPDTFIYNRHCTSLVVMSREGSERYMNVAVKS  159

Query  11134  N--STRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEI  10961
                   +  A +  LYP +Y   C +++RYFP+D Q CT+T  SWT  +  ++Y    + +
Sbjct  160    RHWKDKCGAEVFFLYPALYTIRCRIDIRYFPYDHQNCTLTLGSWTSSKALLNYTT-DKAV  218

Query  10960  GTSNFIENEGW  10928
                 ++I NE W
Sbjct  219    NMHSYIPNEEW  229


>ref|XP_002636519.1|  C. briggsae CBR-DES-2 protein [Caenorhabditis briggsae]
Length=547

 GENE ID: 8578514 Cbr-des-2 | C. briggsae CBR-DES-2 protein
[Caenorhabditis briggsae] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   234 bits (597),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 108/132 (82%), Positives = 121/132 (92%), Gaps = 0/132 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT++ RR
Sbjct  80     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDTQRR  139

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+QVCTMTFSSWTYDQKGIDY  YS++IGTSN++E
Sbjct  140    AALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYFPYSDKIGTSNYLE  199

Query  10939  NEGWYLFKTSSK  10904
              NEGWY+ +T  K
Sbjct  200    NEGWYILQTKIK  211


 Score = 89.4 bits (220),  Expect(2) = 1e-34, Method: Compositional matrix adjust.
 Identities = 44/106 (42%), Positives = 67/106 (63%), Gaps = 5/106 (5%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR + I  LYP IY  +C L++R+FP+D Q CT
Sbjct  113   LYNSLVMKDDDTRRLLNAKLTTD--TQRRAALIELLYPTIYKFSCLLDLRFFPFDVQVCT  170

Query  4114  LTISSWTNSKSALDY--YADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +T SSWT  +  +DY  Y+D ++  ++++ NE W ++  K+ R EV
Sbjct  171   MTFSSWTYDQKGIDYFPYSD-KIGTSNYLENEGWYILQTKIKRREV  215


 Score = 89.0 bits (219),  Expect(2) = 1e-34, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  25    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  82

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  83    DEFLYWNPDDYENITELRLPYDSIWLPDT  111


 Score = 73.9 bits (180),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  214   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  273

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  274   SLGITTL  280


 Score = 46.2 bits (108),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  292   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  336

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  337   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  367


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  305   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  363


 Score = 69.3 bits (168),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  25     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  80


 Score = 67.8 bits (164),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  210    IKRREVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  261

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  262    ------------------TSSASGMREEKVSLGITTL  280


>gb|EGT46511.1|  CBN-DES-2 protein [Caenorhabditis brenneri]
Length=547


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   234 bits (596),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 108/132 (82%), Positives = 121/132 (92%), Gaps = 0/132 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT++ RR
Sbjct  80     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDTQRR  139

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+QVCTMTFSSWTYDQKGIDY  YS++IGTSN++E
Sbjct  140    AALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYFPYSDKIGTSNYLE  199

Query  10939  NEGWYLFKTSSK  10904
              NEGWY+ +T  K
Sbjct  200    NEGWYILQTKIK  211


 Score = 89.7 bits (221),  Expect(2) = 1e-34, Method: Compositional matrix adjust.
 Identities = 44/106 (42%), Positives = 67/106 (63%), Gaps = 5/106 (5%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR + I  LYP IY  +C L++R+FP+D Q CT
Sbjct  113   LYNSLVMKDDDTRRLLNAKLTTD--TQRRAALIELLYPTIYKFSCLLDLRFFPFDVQVCT  170

Query  4114  LTISSWTNSKSALDY--YADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +T SSWT  +  +DY  Y+D ++  ++++ NE W ++  K+ R EV
Sbjct  171   MTFSSWTYDQKGIDYFPYSD-KIGTSNYLENEGWYILQTKIKRREV  215


 Score = 89.4 bits (220),  Expect(2) = 1e-34, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  25    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  82

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  83    DEFLYWNPDDYENITELRLPYDSIWLPDT  111


 Score = 73.9 bits (180),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  214   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  273

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  274   SLGITTL  280


 Score = 46.2 bits (108),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  292   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  336

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  337   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  367


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  305   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  363


 Score = 69.3 bits (168),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  25     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  80


 Score = 67.8 bits (164),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  210    IKRREVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  261

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  262    ------------------TSSASGMREEKVSLGITTL  280


>ref|XP_003101739.1|  CRE-DES-2 protein [Caenorhabditis remanei]
 gb|EFP06903.1|  CRE-DES-2 protein [Caenorhabditis remanei]
Length=566

 GENE ID: 9819057 Cre-des-2 | CRE-DES-2 protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   234 bits (596),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 108/132 (82%), Positives = 121/132 (92%), Gaps = 0/132 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT++ RR
Sbjct  81     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDTQRR  140

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+QVCTMTFSSWTYDQKGIDY  YS++IGTSN++E
Sbjct  141    AALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYFPYSDKIGTSNYLE  200

Query  10939  NEGWYLFKTSSK  10904
              NEGWY+ +T  K
Sbjct  201    NEGWYILQTKIK  212


 Score = 89.4 bits (220),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 44/106 (42%), Positives = 67/106 (63%), Gaps = 5/106 (5%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR + I  LYP IY  +C L++R+FP+D Q CT
Sbjct  114   LYNSLVMKDDDTRRLLNAKLTTD--TQRRAALIELLYPTIYKFSCLLDLRFFPFDVQVCT  171

Query  4114  LTISSWTNSKSALDY--YADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +T SSWT  +  +DY  Y+D ++  ++++ NE W ++  K+ R EV
Sbjct  172   MTFSSWTYDQKGIDYFPYSD-KIGTSNYLENEGWYILQTKIKRREV  216


 Score = 89.0 bits (219),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  26    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  83

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  84    DEFLYWNPDDYENITELRLPYDSIWLPDT  112


 Score = 73.9 bits (180),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  215   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  274

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  275   SLGITTL  281


 Score = 46.2 bits (108),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  293   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  337

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  338   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  368


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  306   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  364


 Score = 69.3 bits (168),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  26     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  81


 Score = 67.8 bits (164),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  211    IKRREVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  262

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  263    ------------------TSSASGMREEKVSLGITTL  281


>ref|NP_001256320.1|  Protein DES-2, isoform a [Caenorhabditis elegans]
 sp|O76554.1|ACH4_CAEEL  RecName: Full=Acetylcholine receptor subunit alpha-type des-2; 
Flags: Precursor
 gb|AAC98095.1|  acetyl choline receptor alpha subunit DES-2 [Caenorhabditis elegans]
 emb|CAA98550.1|  Protein DES-2, isoform a [Caenorhabditis elegans]
Length=548

 GENE ID: 179574 des-2 | Protein DES-2 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   232 bits (591),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 107/132 (81%), Positives = 121/132 (92%), Gaps = 0/132 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLN+KLTT++ RR
Sbjct  81     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNSKLTTDTHRR  140

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+QVCTMTFSSWTYDQKGIDY  YS++IGTSN++E
Sbjct  141    AALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYFPYSDKIGTSNYLE  200

Query  10939  NEGWYLFKTSSK  10904
              NEGWY+ +T  K
Sbjct  201    NEGWYILQTKIK  212


 Score = 89.4 bits (220),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 45/108 (42%), Positives = 68/108 (63%), Gaps = 9/108 (8%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMN--IRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQN  4121
             LYNS+VM  D+T R +N  +  DT     RR + I  LYP IY  +C L++R+FP+D Q 
Sbjct  114   LYNSLVMKDDDTRRLLNSKLTTDT----HRRAALIELLYPTIYKFSCLLDLRFFPFDVQV  169

Query  4120  CTLTISSWTNSKSALDY--YADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             CT+T SSWT  +  +DY  Y+D ++  ++++ NE W ++  K+ R EV
Sbjct  170   CTMTFSSWTYDQKGIDYFPYSD-KIGTSNYLENEGWYILQTKIKRQEV  216


 Score = 89.0 bits (219),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  26    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  83

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  84    DEFLYWNPDDYENITELRLPYDSIWLPDT  112


 Score = 73.9 bits (180),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  215   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  274

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  275   SLGITTL  281


 Score = 46.2 bits (108),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  293   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  337

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  338   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  368


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  306   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  364


 Score = 69.3 bits (168),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  26     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  81


 Score = 68.6 bits (166),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  211    IKRQEVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  262

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  263    ------------------TSSASGMREEKVSLGITTL  281


>ref|NP_001256321.1|  Protein DES-2, isoform b [Caenorhabditis elegans]
 emb|CCG28066.1|  Protein DES-2, isoform b [Caenorhabditis elegans]
Length=559

 GENE ID: 179574 des-2 | Protein DES-2 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   232 bits (591),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 107/132 (81%), Positives = 121/132 (92%), Gaps = 0/132 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLN+KLTT++ RR
Sbjct  81     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNSKLTTDTHRR  140

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+QVCTMTFSSWTYDQKGIDY  YS++IGTSN++E
Sbjct  141    AALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYFPYSDKIGTSNYLE  200

Query  10939  NEGWYLFKTSSK  10904
              NEGWY+ +T  K
Sbjct  201    NEGWYILQTKIK  212


 Score = 89.4 bits (220),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 44/106 (42%), Positives = 67/106 (63%), Gaps = 5/106 (5%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR + I  LYP IY  +C L++R+FP+D Q CT
Sbjct  114   LYNSLVMKDDDTRRLLNSKLTTD--THRRAALIELLYPTIYKFSCLLDLRFFPFDVQVCT  171

Query  4114  LTISSWTNSKSALDY--YADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +T SSWT  +  +DY  Y+D ++  ++++ NE W ++  K+ R EV
Sbjct  172   MTFSSWTYDQKGIDYFPYSD-KIGTSNYLENEGWYILQTKIKRQEV  216


 Score = 89.0 bits (219),  Expect(2) = 2e-34, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  26    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  83

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  84    DEFLYWNPDDYENITELRLPYDSIWLPDT  112


 Score = 74.3 bits (181),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  215   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  274

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  275   SLGITTL  281


 Score = 46.2 bits (108),  Expect(2) = 3e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  293   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  337

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  338   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  368


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  306   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  364


 Score = 69.3 bits (168),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  26     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  81


 Score = 68.6 bits (166),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  211    IKRQEVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  262

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  263    ------------------TSSASGMREEKVSLGITTL  281


>gb|ACO48379.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   213 bits (541),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (250),  Expect(2) = 5e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 5e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 58.9 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+V LIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVKLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 48.1 bits (113),  Expect = 0.062, Method: Compositional matrix adjust.
 Identities = 56/94 (60%), Positives = 59/94 (63%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLV LIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVKLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ACO48389.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
 gb|ACO48390.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   213 bits (541),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (249),  Expect(2) = 6e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 6e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 50.8 bits (120),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 60/94 (64%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ACO48383.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   213 bits (541),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (249),  Expect(2) = 7e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 7e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDEKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDEKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 50.8 bits (120),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 60/94 (64%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ACO48382.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   213 bits (541),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (249),  Expect(2) = 1e-36, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.1 bits (209),  Expect(2) = 1e-36, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD   +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKEAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 62.0 bits (149),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 28/60 (47%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD +AKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKEAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 50.8 bits (120),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 60/94 (64%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ADN33426.1|  ACR-24-like protein [Haemonchus contortus]
 gb|ADN33427.1|  ACR-24-like protein [Haemonchus contortus]
Length=558


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   132 bits (332),  Expect(2) = 1e-56, Method: Compositional matrix adjust.
 Identities = 61/104 (59%), Positives = 79/104 (76%), Gaps = 1/104 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             +YNSVVM  +ETERY+N+   T +W+G RG+ I F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  100   VYNSVVMNREETERYINVVISTNYWKGERGAEIKFMYPALYRTSCMLDIRFFPYDQQECK  159

Query  4114  LTISSWTNSKSALDYYAD-PEVNMASFIPNEEWKVISFKVFRHE  3986
             L ISSWT+SKS +DY A+   VNM +FIPNEEW V+SF + R E
Sbjct  160   LIISSWTSSKSDIDYTAEFHGVNMDNFIPNEEWIVVSFNIKRIE  203


 Score =   120 bits (300),  Expect(2) = 1e-56, Method: Compositional matrix adjust.
 Identities = 51/97 (53%), Positives = 72/97 (74%), Gaps = 0/97 (0%)
 Frame = -3

Query  4652  KHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMW  4473
             + + +P +RL +D++   RYD RVRPV NHS+P  +  SMSLYQ++ +NE  Q + +N+W
Sbjct  4     RGEFLPHIRLAKDLMDKRRYDSRVRPVMNHSQPTTVVFSMSLYQILAINEKRQSVDLNVW  63

Query  4472  MIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +IQKW+D+ L W+P  Y MINTTILP+  IW+PDTYV
Sbjct  64    VIQKWKDDFLGWNPYLYGMINTTILPYEAIWLPDTYV  100


 Score =   103 bits (256),  Expect(2) = 3e-26, Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+IT+V++TGFFT AST+ +R EK+
Sbjct  203   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITMVAVTGFFTAASTSTERREKL  262

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  263   SLGIDSL  269


 Score = 47.8 bits (112),  Expect(2) = 3e-26, Method: Compositional matrix adjust.
 Identities = 36/93 (39%), Positives = 50/93 (54%), Gaps = 13/93 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMPTTSD++PL G              FYL+III+I IGT  T++IL+I  ++ Y +  
Sbjct  281   EQMPTTSDYVPLFG-------------LFYLTIIIVIFIGTLFTAIILNIHLQKMYAQPV  327

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHV  2306
                + Y FF K  +   +  P  L  LWEE  V
Sbjct  328   SPLISYLFFNKVASLLRLHPPTMLLELWEETGV  360


 Score =   125 bits (313),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 59/138 (43%), Positives = 84/138 (61%), Gaps = 2/138 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W D+FL WNP  YG I    LP+  IWLPDT +YNS+VM  ++T R +N  ++TN    
Sbjct  67     KWKDDFLGWNPYLYGMINTTILPYEAIWLPDTYVYNSVVMNREETERYINVVISTNYWKG  126

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               R A I+ +YP +Y+ SC+L++R+FP+D Q C +  SSWT  +  IDY A    +   NF
Sbjct  127    ERGAEIKFMYPALYRTSCMLDIRFFPYDQQECKLIISSWTSSKSDIDYTAEFHGVNMDNF  186

Query  10945  IENEGWYLFKTSSKS*KE  10892
              I NE W +   + K  +E
Sbjct  187    IPNEEWIVVSFNIKRIEE  204


 Score = 42.4 bits (98),  Expect = 8.8, Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 34/58 (59%), Gaps = 2/58 (3%)
 Frame = -1

Query  13411  QLKLIQDLLDS--YDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
               ++L +DL+D   YD++ +P  +  +P  V FSM LYQ+L +    + ++L  W+  +
Sbjct  10     HIRLAKDLMDKRRYDSRVRPVMNHSQPTTVVFSMSLYQILAINEKRQSVDLNVWVIQK  67


>gb|ADN33425.1|  ACR-24-like protein [Haemonchus contortus]
Length=558


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   132 bits (332),  Expect(2) = 1e-56, Method: Compositional matrix adjust.
 Identities = 61/104 (59%), Positives = 79/104 (76%), Gaps = 1/104 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             +YNSVVM  +ETERY+N+   T +W+G RG+ I F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  100   VYNSVVMNREETERYINVVISTNYWKGERGAEIKFMYPALYRTSCMLDIRFFPYDQQECK  159

Query  4114  LTISSWTNSKSALDYYAD-PEVNMASFIPNEEWKVISFKVFRHE  3986
             L ISSWT+SKS +DY A+   VNM +FIPNEEW V+SF + R E
Sbjct  160   LIISSWTSSKSDIDYTAEFHGVNMDNFIPNEEWIVVSFNIKRIE  203


 Score =   120 bits (300),  Expect(2) = 1e-56, Method: Compositional matrix adjust.
 Identities = 51/97 (53%), Positives = 72/97 (74%), Gaps = 0/97 (0%)
 Frame = -3

Query  4652  KHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMW  4473
             + + +P +RL +D++   RYD RVRPV NHS+P  +  SMSLYQ++ +NE  Q + +N+W
Sbjct  4     RGEFLPHIRLAKDLMDKRRYDSRVRPVMNHSQPTTVVFSMSLYQILAINEKRQSVDLNVW  63

Query  4472  MIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +IQKW+D+ L W+P  Y MINTTILP+  IW+PDTYV
Sbjct  64    VIQKWKDDFLGWNPYLYGMINTTILPYEAIWLPDTYV  100


 Score =   125 bits (313),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 59/138 (43%), Positives = 84/138 (61%), Gaps = 2/138 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W D+FL WNP  YG I    LP+  IWLPDT +YNS+VM  ++T R +N  ++TN    
Sbjct  67     KWKDDFLGWNPYLYGMINTTILPYEAIWLPDTYVYNSVVMNREETERYINVVISTNYWKG  126

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               R A I+ +YP +Y+ SC+L++R+FP+D Q C +  SSWT  +  IDY A    +   NF
Sbjct  127    ERGAEIKFMYPALYRTSCMLDIRFFPYDQQECKLIISSWTSSKSDIDYTAEFHGVNMDNF  186

Query  10945  IENEGWYLFKTSSKS*KE  10892
              I NE W +   + K  +E
Sbjct  187    IPNEEWIVVSFNIKRIEE  204


 Score = 99.8 bits (247),  Expect(2) = 3e-25, Method: Compositional matrix adjust.
 Identities = 42/67 (63%), Positives = 59/67 (88%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+IT+V++TGFFT AST+ +  EK+
Sbjct  203   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITMVAVTGFFTAASTSTEGREKL  262

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  263   SLGIDSL  269


 Score = 47.8 bits (112),  Expect(2) = 3e-25, Method: Compositional matrix adjust.
 Identities = 36/93 (39%), Positives = 50/93 (54%), Gaps = 13/93 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMPTTSD++PL G              FYL+III+I IGT  T++IL+I  ++ Y +  
Sbjct  281   EQMPTTSDYVPLFG-------------LFYLTIIIVIFIGTLFTAIILNIHLQKMYAQPV  327

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHV  2306
                + Y FF K  +   +  P  L  LWEE  V
Sbjct  328   SPLISYLFFNKVASLLRLHPPTMLLELWEETGV  360


 Score = 42.4 bits (98),  Expect = 8.9, Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 34/58 (59%), Gaps = 2/58 (3%)
 Frame = -1

Query  13411  QLKLIQDLLDS--YDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
               ++L +DL+D   YD++ +P  +  +P  V FSM LYQ+L +    + ++L  W+  +
Sbjct  10     HIRLAKDLMDKRRYDSRVRPVMNHSQPTTVVFSMSLYQILAINEKRQSVDLNVWVIQK  67


>ref|NP_001255866.1|  Protein ACR-24, isoform a [Caenorhabditis elegans]
 emb|CCE71913.1|  Protein ACR-24, isoform a [Caenorhabditis elegans]
Length=574

 GENE ID: 190686 acr-24 | Protein ACR-24 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   130 bits (326),  Expect(2) = 4e-56, Method: Compositional matrix adjust.
 Identities = 59/104 (57%), Positives = 79/104 (76%), Gaps = 1/104 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM  +ETERY+N+   T +W+G  G+ + F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  122   LYNSVVMNREETERYINVVVTTNYWKGETGAEVKFMYPALYRTSCLLDIRFFPYDQQACK  181

Query  4114  LTISSWTNSKSALDYYADPE-VNMASFIPNEEWKVISFKVFRHE  3986
             LTISSWT+SKS ++Y  + E VNM +F+PNEEW V+SF + R E
Sbjct  182   LTISSWTSSKSDINYEPEHESVNMDNFLPNEEWVVVSFNIKRVE  225


 Score =   120 bits (302),  Expect(2) = 4e-56, Method: Compositional matrix adjust.
 Identities = 54/106 (51%), Positives = 72/106 (68%), Gaps = 3/106 (3%)
 Frame = -3

Query  4670  DPRDGLKHDQ---VPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
               R+ L  D    +P +RL +D+  P RYD RVRPV NHS+P  +  SMSLYQ++ +NE 
Sbjct  17    GAREALMDDYGEFLPHIRLAKDLTDPRRYDSRVRPVMNHSKPTTVSFSMSLYQILSINEK  76

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
              Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDTY+
Sbjct  77    QQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYL  122


 Score =   104 bits (260),  Expect(2) = 6e-27, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  225   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  284

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  285   SLGIDSL  291


 Score = 48.1 bits (113),  Expect(2) = 6e-27, Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 51/95 (54%), Gaps = 15/95 (16%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  303   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  349

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS  2303
              PI V Y FF +   W  +  P  L  LW E  V+
Sbjct  350   SPI-VSYIFFGRIAQWLRMRPPTMLLELWNETGVT  383


 Score =   127 bits (320),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 80/128 (63%), Gaps = 2/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  89     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  148

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  149    ETGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEHESVNMDNF  208

Query  10945  IENEGWYL  10922
              + NE W +
Sbjct  209    LPNEEWVV  216


>ref|NP_001255865.1|  Protein ACR-24, isoform b [Caenorhabditis elegans]
 emb|CCE71912.1|  Protein ACR-24, isoform b [Caenorhabditis elegans]
Length=578

 GENE ID: 190686 acr-24 | Protein ACR-24 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   130 bits (326),  Expect(2) = 4e-56, Method: Compositional matrix adjust.
 Identities = 59/104 (57%), Positives = 79/104 (76%), Gaps = 1/104 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM  +ETERY+N+   T +W+G  G+ + F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  122   LYNSVVMNREETERYINVVVTTNYWKGETGAEVKFMYPALYRTSCLLDIRFFPYDQQACK  181

Query  4114  LTISSWTNSKSALDYYADPE-VNMASFIPNEEWKVISFKVFRHE  3986
             LTISSWT+SKS ++Y  + E VNM +F+PNEEW V+SF + R E
Sbjct  182   LTISSWTSSKSDINYEPEHESVNMDNFLPNEEWVVVSFNIKRVE  225


 Score =   120 bits (301),  Expect(2) = 4e-56, Method: Compositional matrix adjust.
 Identities = 54/106 (51%), Positives = 72/106 (68%), Gaps = 3/106 (3%)
 Frame = -3

Query  4670  DPRDGLKHDQ---VPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
               R+ L  D    +P +RL +D+  P RYD RVRPV NHS+P  +  SMSLYQ++ +NE 
Sbjct  17    GAREALMDDYGEFLPHIRLAKDLTDPRRYDSRVRPVMNHSKPTTVSFSMSLYQILSINEK  76

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
              Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDTY+
Sbjct  77    QQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYL  122


 Score =   104 bits (260),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  225   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  284

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  285   SLGIDSL  291


 Score = 48.1 bits (113),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 51/95 (54%), Gaps = 15/95 (16%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  303   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  349

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS  2303
              PI V Y FF +   W  +  P  L  LW E  V+
Sbjct  350   SPI-VSYIFFGRIAQWLRMRPPTMLLELWNETGVT  383


 Score =   127 bits (320),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 84/138 (61%), Gaps = 2/138 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  89     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  148

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  149    ETGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEHESVNMDNF  208

Query  10945  IENEGWYLFKTSSKS*KE  10892
              + NE W +   + K  +E
Sbjct  209    LPNEEWVVVSFNIKRVEE  226


>gb|ACO48380.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   209 bits (533),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 99/129 (77%), Positives = 112/129 (87%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++ 
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLG  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (249),  Expect(2) = 3e-36, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLGNEGWELLKTEVSRHEV  213


 Score = 83.6 bits (205),  Expect(2) = 3e-36, Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +Y  + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYGKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 61.2 bits (147),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 28/60 (47%), Positives = 40/60 (67%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD Y  KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYGKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 50.4 bits (119),  Expect = 0.012, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 60/94 (64%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ACO48361.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   218 bits (554),  Expect = 8e-56, Method: Compositional matrix adjust.
 Identities = 102/140 (73%), Positives = 116/140 (83%), Gaps = 0/140 (0%)
 Frame = -1

Query  11332  HILPQNKLFF*RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLL  11153
                +P N     RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLL
Sbjct  67     QFVPLNAWIIERWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLL  126

Query  11152  NAKLTTNSTRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY  10973
              NAKLTT+  RRA+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   
Sbjct  127    NAKLTTDLQRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPA  186

Query  10972  SEEIGTSNFIENEGWYLFKT  10913
              S+EI  +N++ENEGW L KT
Sbjct  187    SDEISIANYLENEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVPLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 4e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.1 bits (87),  Expect(2) = 4e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKEQMV  365


 Score = 72.0 bits (175),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 33/64 (52%), Positives = 45/64 (70%), Gaps = 0/64 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRKG  8915
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ K 
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEKE  362

Query  8914  TKVS  8903
               V 
Sbjct  363   QMVE  366


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 64.7 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVPLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.59, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48365.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=478


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.5 bits (184),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 71.6 bits (174),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 48.1 bits (113),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -3

Query  6530  ALKKTKRNFFAVASLS----VVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvl  6363
             +L++ K     V+  S    +   NS + ++R +RQLA  E+EWLATV ER  F IFV+ 
Sbjct  393   SLRRPKNGVAVVSDKSTDALIQMANSGAASIRHNRQLAVAEFEWLATVTERTCFVIFVLC  452

Query  6362  fliisvgINLIGYWHWSDVD  6303
             FLII++GIN+IGY HWS  D
Sbjct  453   FLIITIGINMIGYVHWSKAD  472


>gb|ACO48364.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=478


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 2e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 86.7 bits (213),  Expect(2) = 2e-37, Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QFI +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFILLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 71.6 bits (174),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 64.3 bits (155),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFILLNAWIIER  78


 Score = 48.1 bits (113),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -3

Query  6530  ALKKTKRNFFAVASLS----VVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvl  6363
             +L++ K     V+  S    +   NS + ++R +RQLA  E+EWLATV ER  F IFV+ 
Sbjct  393   SLRRPKNGVAVVSDKSTDALIQMANSGAASIRHNRQLAVAEFEWLATVTERTCFVIFVLC  452

Query  6362  fliisvgINLIGYWHWSDVD  6303
             FLII++GIN+IGY HWS  D
Sbjct  453   FLIITIGINMIGYVHWSKAD  472


>gb|ACO48366.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=478


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.5 bits (184),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 48.1 bits (113),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -3

Query  6530  ALKKTKRNFFAVASLS----VVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvl  6363
             +L++ K     V+  S    +   NS + ++R +RQLA  E+EWLATV ER  F IFV+ 
Sbjct  393   SLRRPKNGVAVVSDKSTDALIQMANSGAASIRHNRQLAVAEFEWLATVTERTCFVIFVLC  452

Query  6362  fliisvgINLIGYWHWSDVD  6303
             FLII++GIN+IGY HWS  D
Sbjct  453   FLIITIGINMIGYVHWSKAD  472


>gb|ACO48374.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=478


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPVNVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.5 bits (184),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.5 bits (153),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 28/60 (47%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +P+NV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPVNVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 48.1 bits (113),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -3

Query  6530  ALKKTKRNFFAVASLS----VVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvl  6363
             +L++ K     V+  S    +   NS + ++R +RQLA  E+EWLATV ER  F IFV+ 
Sbjct  393   SLRRPKNGVAVVSDKSTDALIQMANSGAASIRHNRQLAVAEFEWLATVTERTCFVIFVLC  452

Query  6362  fliisvgINLIGYWHWSDVD  6303
             FLII++GIN+IGY HWS  D
Sbjct  453   FLIITIGINMIGYVHWSKAD  472


>gb|ACO48372.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=478


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 4e-14, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 34.7 bits (78),  Expect(2) = 4e-14, Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q     G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKWGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 68.9 bits (167),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 43/59 (73%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKWGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 48.1 bits (113),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = -3

Query  6530  ALKKTKRNFFAVASLS----VVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvl  6363
             +L++ K     V+  S    +   NS + ++R +RQLA  E+EWLATV ER  F IFV+ 
Sbjct  393   SLRRPKNGVAVVSDKSTDALIQMANSGAASIRHNRQLAVAEFEWLATVTERTCFVIFVLC  452

Query  6362  fliisvgINLIGYWHWSDVD  6303
             FLII++GIN+IGY HWS  D
Sbjct  453   FLIITIGINMIGYVHWSKAD  472


>gb|ACO48369.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (550),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYLPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (249),  Expect(2) = 7e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 70/105 (67%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY  A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYLPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 7e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             W  L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WCILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 67.0 bits (162),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 30/59 (51%), Positives = 43/59 (73%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GW IL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWCILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.54, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48381.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=269


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   208 bits (529),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 98/129 (76%), Positives = 112/129 (87%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTI+KFSCLL+LR+FPFD+Q CTM FSSWTYDQ  IDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIHKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTRIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score = 98.2 bits (243),  Expect(2) = 4e-36, Method: Compositional matrix adjust.
 Identities = 46/105 (44%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP I+  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIHKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTRIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 4e-36, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 63.5 bits (153),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 61.6 bits (148),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 8/75 (11%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS   +        KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRHEV--------KYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTE  2692
              GFFT +S +  R E
Sbjct  255   VGFFTTSSASGMREE  269


 Score = 50.8 bits (120),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 57/94 (61%), Positives = 60/94 (64%), Gaps = 26/94 (28%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREE  10171
                                      TSSASGMREE
Sbjct  260    ------------------------TSSASGMREE  269


>gb|ACO48377.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=533


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 73.2 bits (178),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              G FT +S +  R EK++LGITT+
Sbjct  255   VGLFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  289   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  333

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  334   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  364


 Score = 70.9 bits (172),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  302   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  360


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 69/119 (58%), Positives = 75/119 (63%), Gaps = 27/119 (23%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVG FT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGLFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITT-VSFGLILRVKKSVHRT  10099
                                      TSSASGMREEKVSLGITT +S  L+L V   +  T
Sbjct  260    ------------------------TSSASGMREEKVSLGITTLLSMSLMLMVSDQMPTT  294


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.6 bits (109),  Expect = 0.43, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  436   PAAIIDDDLSLRSDLSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  495

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  496   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  527


>gb|ACO48375.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.6 bits (109),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDLSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48368.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.57, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48371.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=533


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.55, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  436   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  495

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  496   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  527


>gb|ACO48367.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.56, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48360.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 72.0 bits (175),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 45.4 bits (106),  Expect = 0.97, Method: Compositional matrix adjust.
 Identities = 36/77 (47%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
 Frame = -3

Query  6533  TALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvlfli  6354
             +AL  + R     +S     +   + ++R +RQLA  E+EWLATV ER  F IFV+ FLI
Sbjct  452   SALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATVTERTCFVIFVLCFLI  511

Query  6353  isvgINLIGYWHWSDVD  6303
             I++GIN+IGY HWS  D
Sbjct  512   ITIGINMIGYVHWSKAD  528


>gb|ACO48370.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   216 bits (549),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.9 bits (172),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 65.9 bits (159),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.56, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAATIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48376.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   102 bits (253),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.5 bits (184),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 39.3 bits (90),  Expect(2) = 2e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 70.9 bits (172),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 45.1 bits (105),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 36/77 (47%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
 Frame = -3

Query  6533  TALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvlfli  6354
             +AL  + R     +S     +   + ++R +RQLA  E+EWLATV ER  F IFV+ FLI
Sbjct  452   SALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATVTERTCFVIFVLCFLI  511

Query  6353  isvgINLIGYWHWSDVD  6303
             I++GIN+IGY HWS  D
Sbjct  512   ITIGINMIGYVHWSKAD  528


>gb|ACO48378.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   215 bits (548),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 100/129 (78%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 2e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 86.3 bits (212),  Expect(2) = 2e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 5e-16, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 40.8 bits (94),  Expect(2) = 5e-16, Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K TA+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLRIAKMTAYFTCTALPS---------HIEKEQMM  365


 Score = 70.1 bits (170),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R ++I +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLRIAKMTAYFTCTALPSHIEK  361


 Score = 65.9 bits (159),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 47.4 bits (111),  Expect = 0.24, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (59%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +  +  + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PTAIIDDDLSFRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48363.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   214 bits (545),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 99/129 (77%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNA+LTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAELTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   100 bits (250),  Expect(2) = 5e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 70/105 (67%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N    T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAELTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 5e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 79.3 bits (194),  Expect(2) = 1e-16, Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ ++RKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLKRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 38.9 bits (89),  Expect(2) = 1e-16, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ +++M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKEQMM  365


 Score = 71.6 bits (174),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ K
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEK  361


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 64/103 (62%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+L+RKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLKRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 46.2 bits (108),  Expect = 0.56, Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 0/92 (0%)
 Frame = -3

Query  6578  PVLCICSNFVYAFENTALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATV  6399
             P   I  +     + +AL  + R     +S     +   + ++R +RQLA  E+EWLATV
Sbjct  437   PAAIIDDDLSLRSDFSALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATV  496

Query  6398  MERCffgifvvlfliisvgINLIGYWHWSDVD  6303
              ER  F IFV+ FLII++GIN+IGY HWS  D
Sbjct  497   TERTCFVIFVLCFLIITIGINMIGYVHWSKAD  528


>gb|ACO48362.1|  acetylcholine receptor DES-2-like protein [Haemonchus contortus]
Length=534


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   211 bits (538),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 99/129 (77%), Positives = 112/129 (87%), Gaps = 0/129 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+ LP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELWLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSSWTYDQ GIDY   S+EI  +N++E
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSSWTYDQTGIDYFPASDEISIANYLE  197

Query  10939  NEGWYLFKT  10913
              NEGW L KT
Sbjct  198    NEGWELLKT  206


 Score =   101 bits (252),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 71/105 (68%), Gaps = 3/105 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISSWTNSKSALDYY-ADPEVNMASFIPNEEWKVISFKVFRHEV  3983
             +  SSWT  ++ +DY+ A  E+++A+++ NE W+++  +V RHEV
Sbjct  169   MIFSSWTYDQTGIDYFPASDEISIANYLENEGWELLKTEVSRHEV  213


 Score = 85.9 bits (211),  Expect(2) = 3e-37, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELWLPYDSIWLPDT  109


 Score = 75.1 bits (183),  Expect(2) = 6e-15, Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 61/84 (73%), Gaps = 8/84 (10%)
 Frame = -2

Query  2916  ILRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSI  2737
             +L+TEVS          + KY+CCP  + +L  ++ +RRKPL+Y+VNLIIPTSIITL++I
Sbjct  203   LLKTEVSRH--------EVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAI  254

Query  2736  TGFFTPASTADDRTEKINLGITTV  2665
              GFFT +S +  R EK++LGITT+
Sbjct  255   VGFFTTSSASGMREEKVSLGITTL  278


 Score = 37.7 bits (86),  Expect(2) = 6e-15, Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++I++IS+GT ++S+I+++Q R   G+  
Sbjct  290   DQMPTTSTFIPLIG-------------WFILAMIMVISLGTVVSSIIIAVQKRGSLGE--  334

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R     K  A+F C  +P          H+ + +M+
Sbjct  335   RLSKRTLKIAKMIAYFTCTALPS---------HIEKGQMM  365


 Score = 73.9 bits (180),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 45/60 (75%), Gaps = 0/60 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRKG  8915
             GWFIL MI+VIS GT+ SS++IAVQK+G +GERLS R +KI +   Y + + +P H+ KG
Sbjct  303   GWFILAMIMVISLGTVVSSIIIAVQKRGSLGERLSKRTLKIAKMIAYFTCTALPSHIEKG  362


 Score = 66.2 bits (160),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (67%), Gaps = 26/103 (25%)
 Frame = -2

Query  10452  QLSNVSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*V  10273
              +L    V R EVKYSCCPN YTLL LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT  
Sbjct  202    ELLKTEVSRHEVKYSCCPNAYTLLHLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--  259

Query  10272  QGI*L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                      TSSASGMREEKVSLGITT+
Sbjct  260    ------------------------TSSASGMREEKVSLGITTL  278


 Score = 63.9 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


 Score = 45.4 bits (106),  Expect = 0.99, Method: Compositional matrix adjust.
 Identities = 36/77 (47%), Positives = 49/77 (64%), Gaps = 0/77 (0%)
 Frame = -3

Query  6533  TALKKTKRNFFAVASLSVVFYNSSSENVRLSRQLAQKEYEWLATVMERCffgifvvlfli  6354
             +AL  + R     +S     +   + ++R +RQLA  E+EWLATV ER  F IFV+ FLI
Sbjct  452   SALPPSARLLKTKSSTRCNVFKDLTTSIRHNRQLAVAEFEWLATVTERTCFVIFVLCFLI  511

Query  6353  isvgINLIGYWHWSDVD  6303
             I++GIN+IGY HWS  D
Sbjct  512   ITIGINMIGYVHWSKAD  528


>ref|XP_003088117.1|  hypothetical protein CRE_14434 [Caenorhabditis remanei]
 gb|EFO93464.1|  hypothetical protein CRE_14434 [Caenorhabditis remanei]
Length=199

 GENE ID: 9817507 CRE_14434 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   130 bits (327),  Expect(2) = 2e-53, Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 80/101 (79%), Gaps = 1/101 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  99    LYNSVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQACK  158

Query  4114  LTISSWTNSKSALDYYADPE-VNMASFIPNEEWKVISFKVF  3995
             LTISSWT+SKS ++Y  + E VNM +F+PNEEW V+SFK+F
Sbjct  159   LTISSWTSSKSDINYEPEYESVNMDNFLPNEEWVVVSFKLF  199


 Score =   111 bits (277),  Expect(2) = 2e-53, Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 67/92 (73%), Gaps = 1/92 (1%)
 Frame = -3

Query  4637  PQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKW  4458
             P +RL +D++ P RYD RVRPV NHS+P  +  SMSLYQ++ +NE  Q + +N+W IQKW
Sbjct  9     PHIRLAKDLMDPRRYDSRVRPVMNHSKPTTVSFSMSLYQILSINEKQQNVDLNVWAIQKW  68

Query  4457  EDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
              D+ L W+P  Y MINTTIL  + IW+PDTY+
Sbjct  69    NDDFLGWNPYLYGMINTTIL-LDAIWLPDTYL  99


 Score =   118 bits (296),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 57/128 (45%), Positives = 80/128 (63%), Gaps = 3/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    L    IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  67     KWNDDFLGWNPYLYGMINTTIL-LDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  125

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  126    EKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEYESVNMDNF  185

Query  10945  IENEGWYL  10922
              + NE W +
Sbjct  186    LPNEEWVV  193


 Score = 41.6 bits (96),  Expect = 6.0, Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 34/58 (59%), Gaps = 2/58 (3%)
 Frame = -1

Query  13411  QLKLIQDLLDS--YDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
               ++L +DL+D   YD++ +P  +  +P  V+FSM LYQ+L +    + ++L  W   +
Sbjct  10     HIRLAKDLMDPRRYDSRVRPVMNHSKPTTVSFSMSLYQILSINEKQQNVDLNVWAIQK  67


>ref|XP_002632479.1|  C. briggsae CBR-ACR-24 protein [Caenorhabditis briggsae]
Length=532

 GENE ID: 8574476 Cbr-acr-24 | C. briggsae CBR-ACR-24 protein
[Caenorhabditis briggsae] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   124 bits (310),  Expect(2) = 6e-50, Method: Compositional matrix adjust.
 Identities = 59/108 (55%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
 Frame = -1

Query  4294  LYNS--VVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQN  4121
             LYN   VVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+IR+FPYDQQ 
Sbjct  78    LYNRQYVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQA  137

Query  4120  CTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             C LTISSWT+SKS ++Y  +PE   VNM +F+PNEEW V+SF + R E
Sbjct  138   CKLTISSWTSSKSDINY--EPEYESVNMDNFLPNEEWVVVSFNIKRVE  183


 Score =   106 bits (264),  Expect(2) = 6e-50, Method: Compositional matrix adjust.
 Identities = 45/78 (58%), Positives = 58/78 (74%), Gaps = 0/78 (0%)
 Frame = -3

Query  4595  YDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSM  4416
             YD RVRPV NHS+P  +  SMSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y M
Sbjct  1     YDSRVRPVMNHSKPTTVSFSMSLYQILSINEKQQNVDLNVWAIQKWNDDFLGWNPYLYGM  60

Query  4415  INTTILPHNVIWIPDTYV  4362
             INTTILP + IW+PDTY+
Sbjct  61    INTTILPFDAIWLPDTYL  78


 Score =   104 bits (260),  Expect(2) = 1e-26, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  183   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  242

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  243   SLGIDSL  249


 Score = 47.4 bits (111),  Expect(2) = 1e-26, Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 51/95 (54%), Gaps = 15/95 (16%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  261   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  307

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS  2303
              PI V + FF K   W  +  P  L  LW E  V+
Sbjct  308   SPI-VSFIFFGKIAHWLRMRPPTMLLELWNETGVT  341


 Score =   122 bits (305),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 57/130 (44%), Positives = 80/130 (62%), Gaps = 4/130 (3%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNS--LVMKDDDTRRLLNAKLTTN--  11132
              +WND+FL WNP  YG I    LP   IWLPDT LYN   +VM  ++T R +N  +TTN  
Sbjct  45     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNRQYVVMNREETERYINVVVTTNYW  104

Query  11131  STRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTS  10952
                 + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   
Sbjct  105    KGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEYESVNMD  164

Query  10951  NFIENEGWYL  10922
              NF+ NE W +
Sbjct  165    NFLPNEEWVV  174


>ref|XP_001900294.1|  Neurotransmitter-gated ion-channel transmembrane region family 
protein [Brugia malayi]
 gb|EDP31044.1|  Neurotransmitter-gated ion-channel transmembrane region family 
protein [Brugia malayi]
Length=523

 GENE ID: 6103716 Bm1_44160 | Neurotransmitter-gated ion-channel transmembrane
region family protein [Brugia malayi] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   131 bits (330),  Expect(2) = 2e-46, Method: Compositional matrix adjust.
 Identities = 54/99 (55%), Positives = 76/99 (77%), Gaps = 0/99 (0%)
 Frame = -1

Query  4282  VVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCTLTIS  4103
             VVM+ + +ERYMN+   +  W+ + G+ + FLYPA+YT+ CR++IRYFPYD QNCTLT+ 
Sbjct  81    VVMSREGSERYMNVAVKSRHWKDKCGAEVFFLYPALYTIRCRIDIRYFPYDHQNCTLTLG  140

Query  4102  SWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHE  3986
             SWT+SK+ L+Y  D  VNM S+I NEEW ++SF ++RHE
Sbjct  141   SWTSSKALLNYTTDKAVNMHSYILNEEWDILSFNLYRHE  179


 Score = 86.7 bits (213),  Expect(2) = 2e-46, Method: Compositional matrix adjust.
 Identities = 39/77 (51%), Positives = 53/77 (69%), Gaps = 15/77 (19%)
 Frame = -3

Query  4535  MSLYQLIDVNEPSQFIQMNMWMIQ--------------KWEDEMLDWDPRDYSMINTTIL  4398
             MSLYQ++DV+EPSQ++ +N+WMIQ              KW DE LDW+P +Y MIN T+L
Sbjct  1     MSLYQVVDVDEPSQYLTLNIWMIQTDLITITIYLNSLAKWVDEFLDWNPSEYDMINYTVL  60

Query  4397  PHNVIWIPDTYVSLGRH  4347
             PH+ +WIPDT++   RH
Sbjct  61    PHSALWIPDTFI-YNRH  76


 Score = 95.1 bits (235),  Expect(2) = 1e-19, Method: Compositional matrix adjust.
 Identities = 50/103 (49%), Positives = 65/103 (63%), Gaps = 29/103 (28%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITL-----------  2746
             I  F+L+  +Y YACC +PWVI+E  ++IRRKPLYYVVNLIIPT+I+TL           
Sbjct  170   ILSFNLYRHEYLYACCQDPWVIIEGYLIIRRKPLYYVVNLIIPTTILTLGFFNLKILKDA  229

Query  2745  ----------------VSITGFFTPASTADDRTEKINLGITTV  2665
                             ++I GFFTPAST+D+RTEKI +GIT +
Sbjct  230   SLNVADVSRVQSGKCRMAIVGFFTPASTSDERTEKITIGITAL  272


 Score = 33.5 bits (75),  Expect(2) = 1e-19, Method: Compositional matrix adjust.
 Identities = 13/14 (93%), Positives = 14/14 (100%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             DQMPTTSDF+PLIG
Sbjct  284   DQMPTTSDFVPLIG  297


 Score = 94.0 bits (232),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (55%), Gaps = 8/131 (6%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNS-----LVMKDDDTRRLLNAKLTT  11135
              +W DEFL WNP +Y  I    LPH  +W+PDT +YN      +VM  + + R +N  + +
Sbjct  39     KWVDEFLDWNPSEYDMINYTVLPHSALWIPDTFIYNRHSTSFVVMSREGSERYMNVAVKS  98

Query  11134  N--STRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEI  10961
                   +  A +  LYP +Y   C +++RYFP+D Q CT+T  SWT  +  ++Y    + +
Sbjct  99     RHWKDKCGAEVFFLYPALYTIRCRIDIRYFPYDHQNCTLTLGSWTSSKALLNYTT-DKAV  157

Query  10960  GTSNFIENEGW  10928
                 ++I NE W
Sbjct  158    NMHSYILNEEW  168


>ref|XP_003089069.1|  hypothetical protein CRE_21070 [Caenorhabditis remanei]
 gb|EFO87378.1|  hypothetical protein CRE_21070 [Caenorhabditis remanei]
Length=752

 GENE ID: 9814183 CRE_21070 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   126 bits (316),  Expect(2) = 1e-45, Method: Compositional matrix adjust.
 Identities = 59/108 (55%), Positives = 80/108 (74%), Gaps = 5/108 (5%)
 Frame = -1

Query  4300  FQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQN  4121
             F L N VVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+IR+FPYDQQ 
Sbjct  103   FFLMNYVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQA  162

Query  4120  CTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             C LTISSWT+SKS ++Y  +PE   VNM +F+PNEEW V+SF + R E
Sbjct  163   CKLTISSWTSSKSDINY--EPEYESVNMDNFLPNEEWVVVSFNIKRVE  208


 Score = 89.4 bits (220),  Expect(2) = 1e-45, Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 53/87 (61%), Gaps = 12/87 (14%)
 Frame = -3

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             RYD RVRPV NHS+P  +  SMSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y 
Sbjct  19    RYDSRVRPVMNHSKPTTVSFSMSLYQILSINEKQQKVDLNVWAIQKWNDDFLGWNPYLYG  78

Query  4418  MINTTILPHNVIWIPDTYVSLGRHFCR  4338
             MINT            TY  L R+ CR
Sbjct  79    MINT------------TYCHLTRYGCR  93


 Score =   104 bits (260),  Expect(2) = 5e-21, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  208   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  267

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  268   SLGIDSL  274


 Score = 28.5 bits (62),  Expect(2) = 5e-21, Method: Compositional matrix adjust.
 Identities = 10/14 (71%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             +QMPT+SDF+PL G
Sbjct  286   EQMPTSSDFVPLFG  299


 Score = 66.2 bits (160),  Expect(2) = 2e-20, Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 0/49 (0%)
 Frame = -3

Query  4508  NEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             NE  Q + +N+W IQ W D+ L W+P  Y MINTTILP + IW+PDTY+
Sbjct  338   NEKQQNVDLNVWAIQIWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYL  386


 Score = 64.7 bits (156),  Expect(2) = 2e-20, Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 0/50 (0%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIR  4145
             LYNSVVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+IR
Sbjct  386   LYNSVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLHIR  435


 Score = 98.6 bits (244),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 53/136 (39%), Positives = 77/136 (57%), Gaps = 10/136 (7%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYG--NITEVRLPHH-CIWLPDTT-----LYNSLVMKDDDTRRLLNAK  11144
              +WND+FL WNP  YG  N T   L  + C  L   T     L N +VM  ++T R +N  
Sbjct  64     KWNDDFLGWNPYLYGMINTTYCHLTRYGCRILISVTGERFFLMNYVVMNREETERYINVV  123

Query  11143  LTTN--STRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYS  10970
              +TTN     + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    
Sbjct  124    VTTNYWKGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEY  183

Query  10969  EEIGTSNFIENEGWYL  10922
              E +   NF+ NE W +
Sbjct  184    ESVNMDNFLPNEEWVV  199


 Score = 86.3 bits (212),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 40/82 (49%), Positives = 54/82 (66%), Gaps = 2/82 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--STR  11123
              WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN     
Sbjct  354    WNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKGE  413

Query  11122  RAALIELLYPTIYKFSCLLNLR  11057
              + A ++ +YP +Y+ SCLL++R
Sbjct  414    KGAEVKFMYPALYRTSCLLHIR  435


 Score = 48.5 bits (114),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K+ 
Sbjct  458   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKLV  504

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEE  2315
                V Y FF +   W  +  P  L  LW E
Sbjct  505   SPIVSYIFFGRIAQWLRMRPPTMLLELWNE  534


>gb|ACO48397.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (468),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (353),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48401.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48403.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48399.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   138 bits (348),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 59/106 (56%), Positives = 85/106 (80%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+R RP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRARPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48398.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48393.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48396.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48394.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=568


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   123 bits (308),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48402.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (467),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   122 bits (307),  Expect(2) = 2e-42, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 82.4 bits (202),  Expect(2) = 2e-42, Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WF LSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFNLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|ACO48395.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   184 bits (466),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 84/122 (69%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFLYPAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLRWKGENGSQMSFLYPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   122 bits (307),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 68/76 (89%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTSIIT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSIITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 2e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   111 bits (277),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLRWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>ref|NP_001022273.1|  Protein ACR-20, isoform b [Caenorhabditis elegans]
 emb|CAE46678.2|  Protein ACR-20, isoform b [Caenorhabditis elegans]
Length=511

 GENE ID: 187632 acr-20 | Protein ACR-20 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (462),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  +GN+TE+ LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  37     RWTDRLLGWDPEKFGNVTEIMLPHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGN  96

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  97     GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  156

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  157    IENEGWNVLSTS  168


 Score = 91.3 bits (225),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  +I+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  59    PHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  116

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  117   RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  173


 Score = 81.6 bits (200),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 0/63 (0%)
 Frame = -3

Query  4556  PLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWI  4377
             P++++ SM LYQ+I VNEP QF+ +N W++++W D +L WDP  +  +   +LPH+ IW+
Sbjct  6     PIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIWL  65

Query  4376  PDT  4368
             PDT
Sbjct  66    PDT  68


 Score = 62.0 bits (149),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  173   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  232

Query  2685  NLGITTV  2665
              LGITT+
Sbjct  233   TLGITTL  239


 Score = 28.1 bits (61),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 13/60 (22%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             D+MP+TS FIPLIG              FY S+I++IS  T  +SV++ +Q +   G  P
Sbjct  251   DKMPSTSSFIPLIG-------------LFYTSMILLISFSTICSSVVIYVQKQGNLGNPP  297


>ref|NP_001022272.1|  Protein ACR-20, isoform a [Caenorhabditis elegans]
 emb|CAB51466.2|  Protein ACR-20, isoform a [Caenorhabditis elegans]
Length=514

 GENE ID: 187632 acr-20 | Protein ACR-20 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (463),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  +GN+TE+ LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  37     RWTDRLLGWDPEKFGNVTEIMLPHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGN  96

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  97     GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  156

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  157    IENEGWNVLSTS  168


 Score = 91.3 bits (225),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  +I+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  59    PHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  116

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  117   RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  173


 Score = 81.3 bits (199),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 0/63 (0%)
 Frame = -3

Query  4556  PLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWI  4377
             P++++ SM LYQ+I VNEP QF+ +N W++++W D +L WDP  +  +   +LPH+ IW+
Sbjct  6     PIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIWL  65

Query  4376  PDT  4368
             PDT
Sbjct  66    PDT  68


 Score = 62.0 bits (149),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  173   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  232

Query  2685  NLGITTV  2665
              LGITT+
Sbjct  233   TLGITTL  239


 Score = 28.1 bits (61),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 13/60 (22%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             D+MP+TS FIPLIG              FY S+I++IS  T  +SV++ +Q +   G  P
Sbjct  251   DKMPSTSSFIPLIG-------------LFYTSMILLISFSTICSSVVIYVQKQGNLGNPP  297


>ref|XP_002646655.1|  C. briggsae CBR-ACR-20 protein [Caenorhabditis briggsae]
Length=534

 GENE ID: 8588654 Cbr-acr-20 | C. briggsae CBR-ACR-20 protein
[Caenorhabditis briggsae] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (463),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  +GN+TE+ LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  57     RWTDHLLGWDPEKFGNVTEIMLPHHNIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGDGN  116

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  117    GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  176

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  177    IENEGWNVLSTS  188


 Score = 89.7 bits (221),  Expect(2) = 2e-33, Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 5/106 (5%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  DE  R ++ +  TL      G+ I  LYP IY ++C LN+R+FP+D Q+C 
Sbjct  90    LYNSLVMKDDENRRLLHAKVTTL--GDGNGAFIELLYPTIYKLSCLLNLRFFPFDVQSCR  147

Query  4114  LTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  148   LLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  193


 Score = 85.1 bits (209),  Expect(2) = 2e-33, Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 53/77 (69%), Gaps = 0/77 (0%)
 Frame = -3

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             +Y+  + PV    +P++++ SM LYQ+I VNEP Q++ +N W++++W D +L WDP  + 
Sbjct  12    KYNAGLIPVSRTKQPIQVHFSMELYQIISVNEPQQYLMLNAWVVERWTDHLLGWDPEKFG  71

Query  4418  MINTTILPHNVIWIPDT  4368
              +   +LPH+ IW+PDT
Sbjct  72    NVTEIMLPHHNIWLPDT  88


 Score = 62.0 bits (149),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  193   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  252

Query  2685  NLGITTV  2665
              LGITT+
Sbjct  253   TLGITTL  259


 Score = 28.1 bits (61),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  271   DKMPSTSSFIPLIG  284


>ref|XP_003104256.1|  CRE-ACR-20 protein [Caenorhabditis remanei]
 gb|EFP02178.1|  CRE-ACR-20 protein [Caenorhabditis remanei]
Length=432

 GENE ID: 9802880 Cre-acr-20 | CRE-ACR-20 protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   180 bits (456),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  YGN+TE+ LPH+ IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  74     RWTDHLLGWDPEKYGNVTEIMLPHNYIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGN  133

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  134    GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  193

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  194    IENEGWNVLSTS  205


 Score = 93.2 bits (230),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 50/117 (43%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  YI+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  96    PHNYIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  153

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  154   RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  210


 Score = 89.4 bits (220),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 53/77 (69%), Gaps = 0/77 (0%)
 Frame = -3

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             +Y+  + PV    +P++++ SM LYQ+I VNEP Q++ +N W++++W D +L WDP  Y 
Sbjct  29    KYNAGLIPVSKTKQPIQVHFSMELYQIISVNEPQQYLMLNAWVVERWTDHLLGWDPEKYG  88

Query  4418  MINTTILPHNVIWIPDT  4368
              +   +LPHN IW+PDT
Sbjct  89    NVTEIMLPHNYIWLPDT  105


 Score = 62.0 bits (149),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EK
Sbjct  209   HENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEK  268

Query  2688  INLGITTV  2665
             I LGITT+
Sbjct  269   ITLGITTL  276


 Score = 28.1 bits (61),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  288   DKMPSTSSFIPLIG  301


>ref|NP_001122627.1|  Protein ACR-20, isoform c [Caenorhabditis elegans]
 emb|CAQ16152.1|  Protein ACR-20, isoform c [Caenorhabditis elegans]
Length=556

 GENE ID: 187632 acr-20 | Protein ACR-20 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (463),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  +GN+TE+ LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  79     RWTDRLLGWDPEKFGNVTEIMLPHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGN  138

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  139    GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  198

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  199    IENEGWNVLSTS  210


 Score = 91.7 bits (226),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  +I+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  101   PHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  158

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  159   RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  215


 Score = 85.5 bits (210),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 0/77 (0%)
 Frame = -3

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             +Y+  + P      P++++ SM LYQ+I VNEP QF+ +N W++++W D +L WDP  + 
Sbjct  34    KYNAGLIPSMGKKSPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFG  93

Query  4418  MINTTILPHNVIWIPDT  4368
              +   +LPH+ IW+PDT
Sbjct  94    NVTEIMLPHHFIWLPDT  110


 Score = 62.0 bits (149),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  215   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  274

Query  2685  NLGITTV  2665
              LGITT+
Sbjct  275   TLGITTL  281


 Score = 28.1 bits (61),  Expect(2) = 3e-08, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  293   DKMPSTSSFIPLIG  306


>gb|ACO48400.1|  acetylcholine receptor DEG-3-like protein [Haemonchus contortus]
Length=569


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (463),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+ ++L W+G  GS +SFL+PAIY
Sbjct  123   GMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKGENGSQMSFLHPAIY  182

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNS SALDYYADPEVN+ASFIPNEEW V SFK+FR
Sbjct  183   TITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYADPEVNLASFIPNEEWDVKSFKIFR  242

Query  3991  HE  3986
             HE
Sbjct  243   HE  244


 Score =   121 bits (304),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 67/76 (88%), Gaps = 2/76 (3%)
 Frame = -2

Query  2886  ICDFDLF--QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPAS  2713
             +  F +F  +YKYACC EPW IL+AS+VI+RKPLYY+VNLIIPTS IT+VSITGFFTPAS
Sbjct  235   VKSFKIFRHEYKYACCAEPWAILQASLVIQRKPLYYIVNLIIPTSTITIVSITGFFTPAS  294

Query  2712  TADDRTEKINLGITTV  2665
             T DDRTEKINLGITT+
Sbjct  295   TDDDRTEKINLGITTL  310


 Score = 85.5 bits (210),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIII+SIGTFLTSV+LS+Q RRQYG+ P
Sbjct  322   DQMPTTSEFVPLIA-------------WFYLSIIIIVSIGTFLTSVVLSVQSRRQYGRNP  368

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P+Y+RY+FF    ++  V VPP L  LW EL
Sbjct  369   PLYIRYYFFVVIPSFIYVSVPPALENLWSEL  399


 Score =   140 bits (352),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 60/106 (57%), Positives = 86/106 (81%), Gaps = 0/106 (0%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+A        ++VP +RLTRD+L   RYD+RVRP+ +H++PLK++IS+SLYQ+I+V+EP
Sbjct  37    SAASHTRATIMEEVPLIRLTRDLLMKDRYDVRVRPIHDHTKPLKVHISISLYQIIEVDEP  96

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +Q I++N+WMIQKW+DE L WDPR+Y MIN+TI+P   +WIPDTY+
Sbjct  97    AQNIKLNVWMIQKWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYL  142


 Score =   109 bits (273),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L W+P +YG I    +P   +W+PDT LYNS+ M  D+T R +N ++ +     
Sbjct  109    KWKDEYLSWDPREYGMINSTIIPFRHLWIPDTYLYNSVKMSRDETERYMNIQVESLHWKG  168

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 + +  L+P IY  +C LN+R+FP+D Q CT+T SSWT     +DY A   E+  ++F
Sbjct  169    ENGSQMSFLHPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSMSALDYYA-DPEVNLASF  227

Query  10945  IENEGW  10928
              I NE W
Sbjct  228    IPNEEW  233


>gb|AAR98637.1|  acetylcholine receptor 20 (63.9 kD) alternative variant a [Caenorhabditis 
elegans]
Length=553


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   182 bits (462),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (76%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P  +GN+TE+ LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT     
Sbjct  79     RWTDRLLGWDPEKFGNVTEIMLPHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGN  138

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               A IELLYPTIYK SCLLNLR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N 
Sbjct  139    GAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNC  198

Query  10945  IENEGWYLFKTS  10910
              IENEGW +  TS
Sbjct  199    IENEGWNVLSTS  210


 Score = 91.3 bits (225),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  +I+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  101   PHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  158

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  159   RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  215


 Score = 85.5 bits (210),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 0/77 (0%)
 Frame = -3

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             +Y+  + P      P++++ SM LYQ+I VNEP QF+ +N W++++W D +L WDP  + 
Sbjct  34    KYNAGLIPSMGKKSPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFG  93

Query  4418  MINTTILPHNVIWIPDT  4368
              +   +LPH+ IW+PDT
Sbjct  94    NVTEIMLPHHFIWLPDT  110


 Score = 60.5 bits (145),  Expect(2) = 8e-08, Method: Compositional matrix adjust.
 Identities = 38/67 (57%), Positives = 50/67 (75%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  215   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  274

Query  2685  NLGITTV  2665
              LG TT+
Sbjct  275   TLGFTTL  281


 Score = 28.1 bits (61),  Expect(2) = 8e-08, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  293   DKMPSTSSFIPLIG  306


>ref|XP_003088116.1|  hypothetical protein CRE_14433 [Caenorhabditis remanei]
 gb|EFO93463.1|  hypothetical protein CRE_14433 [Caenorhabditis remanei]
Length=219

 GENE ID: 9817508 CRE_14433 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   127 bits (319),  Expect(2) = 8e-44, Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+IR+FPYDQQ C 
Sbjct  70    LYNSVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDIRFFPYDQQACK  129

Query  4114  LTISSWTNSKSALDYYADPE-VNMASFIPNEEWKVISFKV  3998
             LTISSWT+SKS ++Y  + E VNM +F+PNEEW V+SF V
Sbjct  130   LTISSWTSSKSDINYEPEYEYVNMDNFLPNEEWVVVSFTV  169


 Score = 82.4 bits (202),  Expect(2) = 8e-44, Method: Compositional matrix adjust.
 Identities = 35/69 (51%), Positives = 48/69 (70%), Gaps = 0/69 (0%)
 Frame = -3

Query  4568  NHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHN  4389
             NHS+   +  S+SLYQ+  + E  Q + +N+W IQKW D+ L W+P  Y MINTTILP +
Sbjct  2     NHSKSTTVLYSLSLYQIFSIIEKQQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFD  61

Query  4388  VIWIPDTYV  4362
              IW+PDTY+
Sbjct  62    AIWLPDTYL  70


 Score =   125 bits (315),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 2/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  37     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  96

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  97     EKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEYEYVNMDNF  156

Query  10945  IENEGWYL  10922
              + NE W +
Sbjct  157    LPNEEWVV  164


>ref|XP_003101666.1|  CRE-DEG-3 protein [Caenorhabditis remanei]
 gb|EFP06830.1|  CRE-DEG-3 protein [Caenorhabditis remanei]
Length=566

 GENE ID: 9819105 Cre-deg-3 | CRE-DEG-3 protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   124 bits (311),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              +YKYACC EPWVIL+AS+VI+RKPLYY+VNLIIPTSIITLV+ITGFFTPAST DDRTEK
Sbjct  242   HEYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEK  301

Query  2688  INLGITTV  2665
             INLGITT+
Sbjct  302   INLGITTL  309


 Score = 84.7 bits (208),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 58/107 (54%), Positives = 69/107 (64%), Gaps = 18/107 (17%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIIIISIGTFLTSV+LS+QGRRQYG+ P
Sbjct  321   DQMPTTSEFVPLIA-------------WFYLSIIIIISIGTFLTSVVLSVQGRRQYGRNP  367

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEE-----LHVSQKKMLFYL  2279
             P ++RY FF        + VPPPL  LW E     L+V ++K   YL
Sbjct  368   PQFIRYIFFVILPQILLLNVPPPLQTLWGELDDDPLNVRRRKKSHYL  414


 Score =   177 bits (450),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 80/122 (66%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+  + +W+G +GS +SFLYPAIY
Sbjct  122   GMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKGEKGSELSFLYPAIY  181

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNSKSALDYYADP+V+M SFIPNEEW+V SF++ R
Sbjct  182   TITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYADPQVSMQSFIPNEEWQVKSFEIHR  241

Query  3991  HE  3986
             HE
Sbjct  242   HE  243


 Score =   134 bits (338),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 98/139 (71%), Gaps = 2/139 (1%)
 Frame = -3

Query  4775  NLSVALGVLPLQNI-FRKQSLVKIFNNFFNLPASSADPRDGLKHDQVPQVRLTRDILGPG  4599
             N+S+ + +L + N+     SL      F     +S   RD +    VP +RLTR +L P 
Sbjct  4     NVSILILLLSVVNVTITSHSLNATLKTFDPRLLNSTADRD-IAMQNVPLIRLTRHLLSPE  62

Query  4598  RYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYS  4419
             RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EPSQ I++N+WMIQKW+DE LDW+P ++ 
Sbjct  63    RYDVRVRPILDHKKSLKVHISISLYQIIEVDEPSQNIKLNVWMIQKWKDEYLDWNPNEFG  122

Query  4418  MINTTILPHNVIWIPDTYV  4362
             MIN+TI+P + +WIPDTY+
Sbjct  123   MINSTIIPFHHLWIPDTYL  141


 Score =   120 bits (300),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L WNP ++G I    +P H +W+PDT LYNS+ M  D+T R +N ++T+N    
Sbjct  108    KWKDEYLDWNPNEFGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKG  167

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT  +  +DY A   ++   +F
Sbjct  168    EKGSELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA-DPQVSMQSF  226

Query  10945  IENEGWYL  10922
              I NE W +
Sbjct  227    IPNEEWQV  234


>ref|NP_505897.1|  Protein DEG-3 [Caenorhabditis elegans]
 sp|P54244.1|ACH3_CAEEL  RecName: Full=Acetylcholine receptor subunit alpha-type deg-3; 
Flags: Precursor
 gb|AAA92688.1|  nicotinic acetylcholine receptor alpha subunit [Caenorhabditis 
elegans]
 gb|AAA92689.1|  nicotinic acetylcholine receptor alpha subunit precursor [Caenorhabditis 
elegans]
 emb|CAA98507.1|  Protein DEG-3 [Caenorhabditis elegans]
Length=564

 GENE ID: 3565200 deg-3 | Protein DEG-3 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   124 bits (311),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              +YKYACC EPWVIL+AS+VI+RKPLYY+VNLIIPTSIITLV+ITGFFTPAST DDRTEK
Sbjct  242   HEYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEK  301

Query  2688  INLGITTV  2665
             INLGITT+
Sbjct  302   INLGITTL  309


 Score = 84.7 bits (208),  Expect(2) = 1e-43, Method: Compositional matrix adjust.
 Identities = 58/108 (54%), Positives = 69/108 (64%), Gaps = 18/108 (17%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIIIISIGTFLTSV+LS+QGRRQYG+ P
Sbjct  321   DQMPTTSEFVPLIA-------------WFYLSIIIIISIGTFLTSVVLSVQGRRQYGRNP  367

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEE-----LHVSQKKMLFYLK  2276
             P ++RY FF        + VPPPL  LW E     L+V ++K   YL 
Sbjct  368   PQFIRYIFFVLLPQVLLLNVPPPLQTLWGELDDDPLNVRRRKKSHYLS  415


 Score =   177 bits (449),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+A + +W+G +G+ +SFLYPAIY
Sbjct  122   GMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQATSNYWKGEKGAELSFLYPAIY  181

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNSKSALDYYAD EV+M SFIPNEEW+V SFK+ R
Sbjct  182   TITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYADTEVSMQSFIPNEEWQVKSFKIHR  241

Query  3991  HE  3986
             HE
Sbjct  242   HE  243


 Score =   135 bits (341),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 86/106 (81%), Gaps = 2/106 (2%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+AD    +K+  VP VRLTR +L P RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EP
Sbjct  38    STADRDIAMKN--VPLVRLTRHLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEP  95

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             SQ I++N+WMIQKW DE LDW+P +Y MIN+TI+P + +WIPDTY+
Sbjct  96    SQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYL  141


 Score =   122 bits (305),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 57/128 (45%), Positives = 80/128 (63%), Gaps = 3/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L WNP +YG I    +P H +W+PDT LYNS+ M  D+T R +N + T+N    
Sbjct  108    KWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQATSNYWKG  167

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + A +  LYP IY  +C LN+R+FP+D Q CT+T SSWT  +  +DY A   E+   +F
Sbjct  168    EKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA-DTEVSMQSF  226

Query  10945  IENEGWYL  10922
              I NE W +
Sbjct  227    IPNEEWQV  234


>gb|EGT46514.1|  CBN-DEG-3 protein [Caenorhabditis brenneri]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   124 bits (311),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 65/68 (96%), Gaps = 0/68 (0%)
 Frame = -2

Query  2868  FQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEK  2689
              +YKYACC EPWVIL+AS+VI+RKPLYY+VNLIIPTSIITLV+ITGFFTPAST DDRTEK
Sbjct  242   HEYKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEK  301

Query  2688  INLGITTV  2665
             INLGITT+
Sbjct  302   INLGITTL  309


 Score = 83.2 bits (204),  Expect(2) = 4e-43, Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 13/91 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS+F+PLI              WFYLSIIIIISIGTFLTSV+LS+QGRRQYG+ P
Sbjct  321   DQMPTTSEFVPLIA-------------WFYLSIIIIISIGTFLTSVVLSVQGRRQYGRNP  367

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEEL  2312
             P ++RY FF        + VPPPL  LW EL
Sbjct  368   PQFIRYIFFVVLPQILLLNVPPPLQTLWGEL  398


 Score =   177 bits (450),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 80/122 (66%), Positives = 100/122 (82%), Gaps = 0/122 (0%)
 Frame = -1

Query  4351  GISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIY  4172
             G+  +   P  +++     LYNSV M+ DETERYMNI+  + +W+G +GS +SFLYPAIY
Sbjct  122   GMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKGEKGSELSFLYPAIY  181

Query  4171  TVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFR  3992
             T+TCRLNIR+FPYD+QNCTLTISSWTNSKSALDYYADP+V+M SFIPNEEW+V SF++ R
Sbjct  182   TITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYADPQVSMQSFIPNEEWQVKSFEIHR  241

Query  3991  HE  3986
             HE
Sbjct  242   HE  243


 Score =   134 bits (338),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 98/145 (68%), Gaps = 12/145 (8%)
 Frame = -3

Query  4775  NLSVALGVLPLQNIFRKQSLVKIFNNFFNLPASSADPR-------DGLKHDQVPQVRLTR  4617
              L V++ +L L  I      V I ++  N    + DPR         +    VP +RLTR
Sbjct  2     TLKVSITILLLSVI-----TVTISSHSLNATLKTFDPRLLNSTADRDIAMQNVPLIRLTR  56

Query  4616  DILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDW  4437
              +L P RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EPSQ I++N+WMIQKW+DE LDW
Sbjct  57    HLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEPSQNIKLNVWMIQKWKDEYLDW  116

Query  4436  DPRDYSMINTTILPHNVIWIPDTYV  4362
             +P ++ MIN+TI+P + +WIPDTY+
Sbjct  117   NPNEFGMINSTIIPFHHLWIPDTYL  141


 Score =   120 bits (300),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +W DE+L WNP ++G I    +P H +W+PDT LYNS+ M  D+T R +N ++T+N    
Sbjct  108    KWKDEYLDWNPNEFGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQVTSNYWKG  167

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + + +  LYP IY  +C LN+R+FP+D Q CT+T SSWT  +  +DY A   ++   +F
Sbjct  168    EKGSELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA-DPQVSMQSF  226

Query  10945  IENEGWYL  10922
              I NE W +
Sbjct  227    IPNEEWQV  234


>gb|ADN33420.1|  ACR-5-like protein [Haemonchus contortus]
Length=585


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   108 bits (269),  Expect(2) = 1e-42, Method: Compositional matrix adjust.
 Identities = 49/91 (54%), Positives = 67/91 (74%), Gaps = 0/91 (0%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q RL  D+L    Y+  V P  +H +P +I +SMSLYQ++DV+E SQ I +N+WM+Q W 
Sbjct  97    QRRLVDDLLDESYYEKHVHPRVDHLKPTRINVSMSLYQILDVDEHSQSIVVNVWMVQNWY  156

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             DE LDWDPR+Y M+N TI+P++ IWIPDTY+
Sbjct  157   DEFLDWDPREYGMLNKTIVPYDQIWIPDTYL  187


 Score = 97.4 bits (241),  Expect(2) = 1e-42, Method: Compositional matrix adjust.
 Identities = 44/105 (42%), Positives = 69/105 (66%), Gaps = 2/105 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +T+  MN   +T FW     G+ +  ++PAIY ++C +N+++FPYD QNC
Sbjct  187   LYNSEALERKKTKSIMNAIVETGFWSNNSLGARVQLMFPAIYKLSCAMNVQWFPYDSQNC  246

Query  4117  TLTISSWTNSKSALDYYAD-PEVNMASFIPNEEWKVISFKVFRHE  3986
             T  ISSWT+ K+ +DY+A+ P VN+ +   N+EW+V+ F+  R E
Sbjct  247   TFIISSWTHDKATIDYWAEHPTVNLKNMARNDEWEVLGFEFERIE  291


 Score = 99.4 bits (246),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 58/72 (81%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F+  +  + CC  PWV+L A +VIRRKPLYYV+NL+IPTSIIT+V+ITGFFTP ST+ +
Sbjct  286   EFERIEQIFKCCANPWVLLYAHLVIRRKPLYYVINLVIPTSIITIVAITGFFTPTSTSSE  345

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  346   RDEKLYLGINTL  357


 Score = 41.2 bits (95),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (54%), Gaps = 13/99 (13%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+YL III+I +GT L +++L+I G++++ +  
Sbjct  369   NQMPSTSSYVPLMS-------------WYYLGIIIVIVLGTLLATIVLAIHGQKRHNRPL  415

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVSQKKML  2288
               + R     +F   F +  P  L  LW E  + +++ L
Sbjct  416   SRWARGLVLNRFVETFILRPPCALVDLWSEYGIVEERRL  454


 Score =   108 bits (271),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 50/126 (40%), Positives = 78/126 (62%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL W+P +YG + +  +P+  IW+PDT LYNS  ++   T+ ++NA + T   ++ 
Sbjct  155    WYDEFLDWDPREYGMLNKTIVPYDQIWIPDTYLYNSEALERKKTKSIMNAIVETGFWSNN  214

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 A ++L++P IYK SC +N+++FP+D Q CT   SSWT+D+  IDY A    +   N 
Sbjct  215    SLGARVQLMFPAIYKLSCAMNVQWFPYDSQNCTFIISSWTHDKATIDYWAEHPTVNLKNM  274

Query  10945  IENEGW  10928
                N+ W
Sbjct  275    ARNDEW  280


>gb|ADN33421.1|  ACR-5-like protein [Haemonchus contortus]
Length=585


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   105 bits (262),  Expect(2) = 2e-42, Method: Compositional matrix adjust.
 Identities = 47/91 (52%), Positives = 65/91 (71%), Gaps = 0/91 (0%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q RL  D+L    Y+    P  +H +P +I + MSLYQ++DV+E SQ I +N+WM+Q W 
Sbjct  97    QRRLVDDLLDESYYEKHAHPRVDHLKPTRINVGMSLYQILDVDEHSQSIVVNVWMVQNWY  156

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             DE LDWDPR+Y M+N TI+P++ IWIPDTY+
Sbjct  157   DEFLDWDPREYGMLNKTIVPYDQIWIPDTYL  187


 Score = 99.4 bits (246),  Expect(2) = 2e-42, Method: Compositional matrix adjust.
 Identities = 45/105 (43%), Positives = 69/105 (66%), Gaps = 2/105 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +TE  MN   +T FW     G+ +  ++PAIY ++C +N+++FPYD QNC
Sbjct  187   LYNSEALERKKTESIMNAIVETGFWSNNSLGARVQLMFPAIYKLSCAMNVQWFPYDSQNC  246

Query  4117  TLTISSWTNSKSALDYYAD-PEVNMASFIPNEEWKVISFKVFRHE  3986
             T  ISSWT+ K+ +DY+A+ P VN+ +   N+EW+V+ F+  R E
Sbjct  247   TFIISSWTHDKATIDYWAEHPTVNLKNMARNDEWEVLGFEFERIE  291


 Score = 99.4 bits (246),  Expect(2) = 3e-23, Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 58/72 (81%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F+  +  + CC  PWV+L A +VIRRKPLYYV+NL+IPTSIIT+V+ITGFFTP ST+ +
Sbjct  286   EFERIEQIFKCCANPWVLLYAHLVIRRKPLYYVINLVIPTSIITIVAITGFFTPTSTSSE  345

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  346   RDEKLYLGINTL  357


 Score = 41.2 bits (95),  Expect(2) = 3e-23, Method: Compositional matrix adjust.
 Identities = 30/104 (29%), Positives = 55/104 (53%), Gaps = 13/104 (13%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+YL III+I +GT L +++L+I G++++ +  
Sbjct  369   NQMPSTSSYVPLMS-------------WYYLGIIIVIVLGTLLATIVLAIHGQKRHNRPL  415

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVSQKKMLFYLKV  2273
               + R     +F   F +  P  L  LW E  + +++ L   K+
Sbjct  416   SRWARGHVLNRFVETFILRPPCALVDLWSEYGIVEERRLSMSKL  459


 Score =   107 bits (268),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 50/126 (40%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL W+P +YG + +  +P+  IW+PDT LYNS  ++   T  ++NA + T   ++ 
Sbjct  155    WYDEFLDWDPREYGMLNKTIVPYDQIWIPDTYLYNSEALERKKTESIMNAIVETGFWSNN  214

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 A ++L++P IYK SC +N+++FP+D Q CT   SSWT+D+  IDY A    +   N 
Sbjct  215    SLGARVQLMFPAIYKLSCAMNVQWFPYDSQNCTFIISSWTHDKATIDYWAEHPTVNLKNM  274

Query  10945  IENEGW  10928
                N+ W
Sbjct  275    ARNDEW  280


>gb|ACO48373.1|  mutant acetylcholine receptor DES-2-like protein [Haemonchus 
contortus]
Length=173


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   166 bits (420),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 88/96 (92%), Gaps = 0/96 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW+PM+Y NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT+  RR
Sbjct  78     RWYDEFLYWSPMEYQNITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDLQRR  137

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSS  11012
              A+LIELLYPTIYKFSCLL+LR+FPFD+Q CTM FSS
Sbjct  138    ASLIELLYPTIYKFSCLLDLRFFPFDVQNCTMIFSS  173


 Score = 85.5 bits (210),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 63/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q++L  D+L   +YD + +P+ ++++P+ +  ++SLYQ++++NEP QF+ +N W+I++W 
Sbjct  23    QIQLVHDLLD--KYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIERWY  80

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W P +Y  I    LP++ IW+PDT
Sbjct  81    DEFLYWSPMEYQNITELRLPYDSIWLPDT  109


 Score = 68.9 bits (167),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (65%), Gaps = 2/65 (3%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR S I  LYP IY  +C L++R+FP+D QNCT
Sbjct  111   LYNSLVMKDDDTRRLLNAKLTTDL--QRRASLIELLYPTIYKFSCLLDLRFFPFDVQNCT  168

Query  4114  LTISS  4100
             +  SS
Sbjct  169   MIFSS  173


 Score = 63.2 bits (152),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 0/60 (0%)
 Frame = -1

Query  13423  ASSDQLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              ++  Q++L+ DLLD YD KAKP WD  +PINV+F++ LYQ+LEL    + + L  WI  R
Sbjct  19     STPTQIQLVHDLLDKYDKKAKPMWDNTKPINVSFTVSLYQILELNEPQQFVLLNAWIIER  78


>ref|XP_002641021.1|  C. briggsae CBR-ACR-5 protein [Caenorhabditis briggsae]
Length=570

 GENE ID: 8583015 Cbr-acr-5 | C. briggsae CBR-ACR-5 protein
[Caenorhabditis briggsae] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   102 bits (253),  Expect(2) = 2e-41, Method: Compositional matrix adjust.
 Identities = 46/107 (43%), Positives = 72/107 (67%), Gaps = 2/107 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +TE  MN + +T  W  ++ G+ +  ++PAIY ++CR+++R+FPYD+QNC
Sbjct  177   LYNSEELEQKKTESLMNAQLETGHWSQKKNGAKVQLMFPAIYKLSCRMDVRWFPYDRQNC  236

Query  4117  TLTISSWTNSKSALDYYA-DPEVNMASFIPNEEWKVISFKVFRHEVS  3980
             T  ISSWT+ K  +DY+    +VN+ +   N+EW+VISF+  R E S
Sbjct  237   TFIISSWTHDKQTIDYWPLSSQVNLGNMARNDEWEVISFEFVRVEES  283


 Score =   100 bits (248),  Expect(2) = 2e-41, Method: Compositional matrix adjust.
 Identities = 46/91 (51%), Positives = 67/91 (74%), Gaps = 5/91 (5%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q RL  ++L P  Y+  V P +++++P +I +SMSLYQ++DV+     I++N+WM+Q W 
Sbjct  92    QRRLVEELLDPNFYEKTVHPRKDYTQPTRINLSMSLYQILDVS-----IEVNVWMVQHWY  146

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             DE LDW+P DY MIN TI+P+N IWIPDTY+
Sbjct  147   DEFLDWNPVDYGMINRTIVPYNQIWIPDTYL  177


 Score =   121 bits (303),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 55/126 (44%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL WNP+DYG I    +P++ IW+PDT LYNS  ++   T  L+NA+L T   +  
Sbjct  145    WYDEFLDWNPVDYGMINRTIVPYNQIWIPDTYLYNSEELEQKKTESLMNAQLETGHWSQK  204

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
              +  A ++L++P IYK SC +++R+FP+D Q CT   SSWT+D++ IDY   S ++   N 
Sbjct  205    KNGAKVQLMFPAIYKLSCRMDVRWFPYDRQNCTFIISSWTHDKQTIDYWPLSSQVNLGNM  264

Query  10945  IENEGW  10928
                N+ W
Sbjct  265    ARNDEW  270


 Score = 94.7 bits (234),  Expect(2) = 1e-19, Method: Compositional matrix adjust.
 Identities = 41/72 (57%), Positives = 57/72 (79%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F   +  + CC  PWV+L A +VIRRKPLYY++NL+IPTSIIT+V++TGFFTP S++ +
Sbjct  276   EFVRVEESFKCCAAPWVMLYAHLVIRRKPLYYMINLVIPTSIITIVAVTGFFTPTSSSSE  335

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  336   RDEKLYLGINTL  347


 Score = 33.9 bits (76),  Expect(2) = 1e-19, Method: Compositional matrix adjust.
 Identities = 35/111 (32%), Positives = 58/111 (52%), Gaps = 23/111 (21%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+Y+ II++I +GTFL + +L+I G++ Y K  
Sbjct  359   NQMPSTSTYVPLMS-------------WYYIGIIMVIVVGTFLATGVLAIHGQKHYNK--  403

Query  2404  PIYVRY--WFFCKFTAWFCVGVPPPLAVLWEELHV-SQKKMLFYLKVILVR  2261
             PI  R       +F +      P  L  LW E  V S+++   +L  +LV+
Sbjct  404   PISDRAPVIVMARFKS-----PPTSLIDLWTEFGVISEQRHSTHLDPLLVQ  449


>gb|ACO48337.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=272


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   166 bits (421),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 76/134 (57%), Positives = 100/134 (75%), Gaps = 2/134 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTSSK  10904
              I+NEGW + +T+ +
Sbjct  202    IDNEGWTVLRTTVE  215


 Score = 80.5 bits (197),  Expect(2) = 5e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.7 bits (195),  Expect(2) = 5e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 69.3 bits (168),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 31/52 (60%), Positives = 39/52 (75%), Gaps = 0/52 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTAD  2704
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSIND  271


>gb|ACO48336.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=272


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   166 bits (419),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 76/134 (57%), Positives = 100/134 (75%), Gaps = 2/134 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCRLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTSSK  10904
              I+NEGW + +T+ +
Sbjct  202    IDNEGWTVLRTTVE  215


 Score = 80.1 bits (196),  Expect(2) = 3e-28, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   RLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 77.4 bits (189),  Expect(2) = 3e-28, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 62/104 (60%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF  +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFPMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 69.3 bits (168),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 31/52 (60%), Positives = 39/52 (75%), Gaps = 0/52 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTAD  2704
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSIND  271


>gb|EGT54971.1|  hypothetical protein CAEBREN_30784 [Caenorhabditis brenneri]
Length=516


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   172 bits (435),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 86/132 (65%), Positives = 99/132 (75%), Gaps = 21/132 (16%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYWNP DY NITE+RLP+  IWLPDTTLYNSLVMKDDDTRRLLNAKLTT++ RR
Sbjct  70     RWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNAKLTTDTQRR  129

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AALIELLYPTIYKFSCLL+LR+FPFD+Q                     S++IGTS ++E
Sbjct  130    AALIELLYPTIYKFSCLLDLRFFPFDVQ---------------------SDKIGTSFYLE  168

Query  10939  NEGWYLFKTSSK  10904
               E WY+ +T  K
Sbjct  169    LEKWYILQTKIK  180


 Score = 89.4 bits (220),  Expect(2) = 5e-25, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 62/89 (70%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q+RL  D+L    YD + +P+ ++S+P+ +  SM LYQ++++NEP Q+I +N W+I++W 
Sbjct  15    QIRLVHDLLD--NYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIERWF  72

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             DE L W+P DY  I    LP++ IW+PDT
Sbjct  73    DEFLYWNPDDYENITELRLPYDSIWLPDT  101


 Score = 57.4 bits (137),  Expect(2) = 5e-25, Method: Compositional matrix adjust.
 Identities = 32/104 (31%), Positives = 52/104 (50%), Gaps = 22/104 (21%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+VM  D+T R +N +  T     RR + I  LYP IY  +C L++R+FP+D Q+  
Sbjct  103   LYNSLVMKDDDTRRLLNAKLTTD--TQRRAALIELLYPTIYKFSCLLDLRFFPFDVQS--  158

Query  4114  LTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISFKVFRHEV  3983
                                ++  + ++  E+W ++  K+ R EV
Sbjct  159   ------------------DKIGTSFYLELEKWYILQTKIKRREV  184


 Score = 74.3 bits (181),  Expect(2) = 2e-17, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 55/67 (82%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KYACCP  + +L+ ++ +RRKPL+Y+VNLIIPTSIITL++I GFFT +S +  R EK+
Sbjct  183   EVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFTTSSASGMREEKV  242

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  243   SLGITTL  249


 Score = 46.6 bits (109),  Expect(2) = 2e-17, Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 25/100 (25%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             DQMPTTS FIPLIG             WF L++II+IS+GT ++SVI++IQ R   G+  
Sbjct  261   DQMPTTSTFIPLIG-------------WFILAMIIVISLGTVVSSVIIAIQKRGSLGE--  305

Query  2404  PIYVRYWFFCKFTAWF-CVGVPPPLAVLWEELHVSQKKML  2288
              +  R   F K  AWF C  +PP         HV ++ M+
Sbjct  306   RMSKRALKFAKVLAWFTCTSLPP---------HVEKEHMM  336


 Score = 70.5 bits (171),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/59 (53%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRK  8918
             GWFIL MIIVIS GT+ SSV+IA+QK+G +GER+S RA+K  +   + + + +P H+ K
Sbjct  274   GWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALKFAKVLAWFTCTSLPPHVEK  332


 Score = 69.3 bits (168),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
 Frame = -1

Query  13411  QLKLIQDLLDSYDNKAKPTWDAFRPINVTFSMDLYQLLELVRVFEKLNLGFWIYHR  13244
              Q++L+ DLLD+YD KAKP WD  +PINV+FSMDLYQ+LEL    + + L  WI  R
Sbjct  15     QIRLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEPQQYILLNAWIIER  70


 Score = 67.8 bits (164),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 64/97 (66%), Positives = 70/97 (72%), Gaps = 26/97 (27%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              +KR EVKY+CCPNNYTLL+LTL+LRRKPLFYLVNLIIPT+IITLIAIVGFFT        
Sbjct  179    IKRREVKYACCPNNYTLLQLTLYLRRKPLFYLVNLIIPTSIITLIAIVGFFT--------  230

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                TSSASGMREEKVSLGITT+
Sbjct  231    ------------------TSSASGMREEKVSLGITTL  249


>ref|XP_003093420.1|  CRE-ACR-5 protein [Caenorhabditis remanei]
 gb|EFO94159.1|  CRE-ACR-5 protein [Caenorhabditis remanei]
Length=583

 GENE ID: 9822768 Cre-acr-5 | CRE-ACR-5 protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   100 bits (249),  Expect(2) = 2e-40, Method: Compositional matrix adjust.
 Identities = 46/107 (43%), Positives = 72/107 (67%), Gaps = 2/107 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +TE  MN + +T  W+ ++ G+ +  ++PAIY ++CR+++R+FPYD+QNC
Sbjct  182   LYNSEELEQKKTESLMNAQLETGHWDQKQTGAKVQLMFPAIYKLSCRMDVRWFPYDRQNC  241

Query  4117  TLTISSWTNSKSALDYYA-DPEVNMASFIPNEEWKVISFKVFRHEVS  3980
             T  ISSWT+ K  +DY+     VN+ +   N+EW+VISF+  R E S
Sbjct  242   TFIISSWTHDKQTIDYWPLSSTVNLGNMARNDEWEVISFEFVRVEES  288


 Score = 98.2 bits (243),  Expect(2) = 2e-40, Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 15/106 (14%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDV---------------NEP  4500
             Q RL  ++L P  Y+  V P ++++RP ++ +SMSLYQ++DV               +E 
Sbjct  77    QRRLVEELLDPNYYEKTVHPRRDYTRPTRVNLSMSLYQILDVVSQLKIRSTEQTVFQDEH  136

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
              Q I++N+WM+Q W DE LDW+P DY MIN TI+P++ IWIPDTY+
Sbjct  137   MQSIEVNVWMVQHWYDEFLDWNPADYGMINRTIVPYHQIWIPDTYL  182


 Score =   121 bits (304),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 79/126 (63%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL WNP DYG I    +P+H IW+PDT LYNS  ++   T  L+NA+L T   +  
Sbjct  150    WYDEFLDWNPADYGMINRTIVPYHQIWIPDTYLYNSEELEQKKTESLMNAQLETGHWDQK  209

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
              +  A ++L++P IYK SC +++R+FP+D Q CT   SSWT+D++ IDY   S  +   N 
Sbjct  210    QTGAKVQLMFPAIYKLSCRMDVRWFPYDRQNCTFIISSWTHDKQTIDYWPLSSTVNLGNM  269

Query  10945  IENEGW  10928
                N+ W
Sbjct  270    ARNDEW  275


 Score = 94.4 bits (233),  Expect(2) = 1e-22, Method: Compositional matrix adjust.
 Identities = 41/72 (57%), Positives = 57/72 (79%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F   +  + CC  PWV+L A +VIRRKPLYY++NL+IPTSIIT+V++TGFFTP S++ +
Sbjct  281   EFVRVEESFKCCAAPWVMLYAHLVIRRKPLYYMINLVIPTSIITIVAVTGFFTPTSSSSE  340

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  341   RDEKLYLGINTL  352


 Score = 43.9 bits (102),  Expect(2) = 1e-22, Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (54%), Gaps = 14/110 (13%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+Y+ II++I +GTFL + +L+I G++ Y K  
Sbjct  364   NQMPSTSTYVPLMS-------------WYYIGIIMVIVVGTFLATGVLAIHGQKHYNKPI  410

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHV-SQKKMLFYLKVILVRS  2258
                +R   +  F  +F +  P  L  LW E  V S+++    L  +L+++
Sbjct  411   SDRIRRLIYNPFVEFFILSPPTSLIDLWTEFGVISEQRHSTNLDPLLIQN  460


>gb|ACN56910.1|  mutant ACR-23-like protein [Haemonchus contortus]
Length=215


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   162 bits (410),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 74/134 (55%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLT     +
Sbjct  25     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTARGKDK  84

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FP D+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  85     GALVELLYPTIYKLSCLLDLRFFPLDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  144

Query  10945  IENEGWYLFKTSSK  10904
              I+NEGW + +T+ +
Sbjct  145    IDNEGWTVLRTTVE  158


 Score = 77.0 bits (188),  Expect(2) = 3e-25, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +   L   G+ +G+ +  LYP IY ++C L++R+FP D Q C
Sbjct  58    LYNSLVMDDHDTRRLLNAK---LTARGKDKGALVELLYPTIYKLSCLLDLRFFPLDVQTC  114

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  115   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  165


 Score = 70.1 bits (170),  Expect(2) = 3e-25, Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = -3

Query  4535  MSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             M LYQ+I VNEP QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  1     MELYQIIQVNEPQQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  56


 Score = 68.9 bits (167),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 31/52 (60%), Positives = 39/52 (75%), Gaps = 0/52 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTAD  2704
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D
Sbjct  163   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSIND  214


>gb|EGT54700.1|  hypothetical protein CAEBREN_30303 [Caenorhabditis brenneri]
Length=611


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 98.6 bits (244),  Expect(2) = 9e-40, Method: Compositional matrix adjust.
 Identities = 46/107 (43%), Positives = 70/107 (65%), Gaps = 2/107 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +TE  MN + +T  W  +  G+ +  ++PAIY ++CR+++R+FPYD+QNC
Sbjct  210   LYNSEELEQKKTESLMNAQLETGHWNQKNNGAKVQLMFPAIYKLSCRMDVRWFPYDRQNC  269

Query  4117  TLTISSWTNSKSALDYYA-DPEVNMASFIPNEEWKVISFKVFRHEVS  3980
             T  ISSWT+ K  +DY+     VN+ +   N+EW+VISF+  R E S
Sbjct  270   TFIISSWTHDKQTIDYWPLSSTVNLGNMARNDEWEVISFEFVRVEES  316


 Score = 97.4 bits (241),  Expect(2) = 9e-40, Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 15/106 (14%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDV---NEPSQFIQM------  4482
             Q RL  ++L P  Y+  V P ++++RP ++ +SMSLYQ++DV   + P +F+Q+      
Sbjct  105   QRRLVEELLDPNFYEKTVHPRRDYTRPTRVNLSMSLYQILDVVSLSSPKKFLQLHFQDEH  164

Query  4481  ------NMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
                   N+WM+Q W DE LDW+P DY MIN TI+P++ IWIPDTY+
Sbjct  165   MQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDTYL  210


 Score =   123 bits (308),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 79/126 (63%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL WNP+DYG I    +P+H IW+PDT LYNS  ++   T  L+NA+L T   N  
Sbjct  178    WYDEFLDWNPVDYGMINRTIVPYHQIWIPDTYLYNSEELEQKKTESLMNAQLETGHWNQK  237

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
                 A ++L++P IYK SC +++R+FP+D Q CT   SSWT+D++ IDY   S  +   N 
Sbjct  238    NNGAKVQLMFPAIYKLSCRMDVRWFPYDRQNCTFIISSWTHDKQTIDYWPLSSTVNLGNM  297

Query  10945  IENEGW  10928
                N+ W
Sbjct  298    ARNDEW  303


 Score = 94.4 bits (233),  Expect(2) = 2e-21, Method: Compositional matrix adjust.
 Identities = 41/72 (57%), Positives = 57/72 (79%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F   +  + CC  PWV+L A +VIRRKPLYY++NL+IPTSIIT+V++TGFFTP S++ +
Sbjct  309   EFVRVEESFKCCAAPWVMLYAHLVIRRKPLYYMINLVIPTSIITIVAVTGFFTPTSSSSE  368

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  369   RDEKLYLGINTL  380


 Score = 39.7 bits (91),  Expect(2) = 2e-21, Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 14/109 (13%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+Y+ II++I +GTFL + +L+I G++ Y K  
Sbjct  392   NQMPSTSTYVPLMS-------------WYYIGIIMVIVVGTFLATGVLAIHGQKHYNKPI  438

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHV-SQKKMLFYLKVILVR  2261
                +R   +     +F +  P  L  LW E  V S+++    L  +L++
Sbjct  439   SDRIRRLIYNPVVEFFILSPPTSLIDLWTEFGVISEQRHSTNLDPLLIQ  487


>gb|ACO48356.1|  mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=473


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  69     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  128

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  129    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  188

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  189    IDNEGWTVLRTT  200


 Score = 80.9 bits (198),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  102   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  158

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  159   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  209


 Score = 60.1 bits (144),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 20/47 (43%), Positives = 35/47 (74%), Gaps = 0/47 (0%)
 Frame = -3

Query  4508  NEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             NEP QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  54    NEPQQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  100


 Score = 84.0 bits (206),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  207   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  266

Query  2679  GITTV  2665
             GITT+
Sbjct  267   GITTL  271


 Score = 27.7 bits (60),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  283   DKMPSTSSFIPLIG  296


 Score = 47.8 bits (112),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  199    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  252

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  253    --------------------SSSINDLREEKITLGITTL  271


>gb|ACO48355.1|  mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=447


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (422),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.5 bits (197),  Expect(2) = 2e-28, Method: Compositional matrix adjust.
 Identities = 41/112 (37%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH ++ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-INHYD  222


 Score = 77.4 bits (189),  Expect(2) = 2e-28, Method: Compositional matrix adjust.
 Identities = 35/104 (34%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM L+Q+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELHQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 47.8 bits (112),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHINHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48357.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=494


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 2e-28, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 77.4 bits (189),  Expect(2) = 2e-28, Method: Compositional matrix adjust.
 Identities = 33/92 (36%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = -3

Query  4643  QVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQ  4464
             +VP+  L  + +   RY+  + P +  +  +K+  SM L+Q+I VNEP QF+ +N W+++
Sbjct  23    EVPEHYLITNFI-LSRYNKDLIPKRLQNESIKVSFSMELHQIIQVNEPQQFLMLNAWIVE  81

Query  4463  KWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             +W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  82    RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 85.9 bits (211),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 50/65 (77%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE+ + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLESHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 48.5 bits (114),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLESHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48354.1|  mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=451


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (422),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 4e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.3 bits (194),  Expect(2) = 4e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 82.0 bits (201),  Expect(2) = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 48/65 (74%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NL  PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLTTPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 3e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 48.5 bits (114),  Expect = 0.10, Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 59/99 (60%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NL  PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLTTPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACN56912.1|  mutant ACR-23-like protein [Haemonchus contortus]
Length=447


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   166 bits (421),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 5e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.3 bits (194),  Expect(2) = 5e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLRNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 48.1 bits (113),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|EJW88493.1|  acetylcholine receptor subunit alpha-type des-2 [Wuchereria bancrofti]
Length=471


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   166 bits (421),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 83/137 (61%), Positives = 95/137 (69%), Gaps = 22/137 (16%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW DEFLYW P DY NITE+ LPH  IWLPDTTLYNSLVMKDDDTRRLLN KLT +    
Sbjct  25     RWYDEFLYWRPEDYDNITEIHLPHSSIWLPDTTLYNSLVMKDDDTRRLLNVKLTADENIH  84

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIE  10940
              AA IELLYPTIYKFSCLLNLR+FPFD+Q                        +GT+N+IE
Sbjct  85     AAYIELLYPTIYKFSCLLNLRFFPFDIQ---------------------GNIVGTTNYIE  123

Query  10939  NEGWYLFKTSSKS*KEI  10889
              NEGW++ +T+ K  KE+
Sbjct  124    NEGWHILRTTVKK-KEV  139


 Score = 81.6 bits (200),  Expect(2) = 1e-16, Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 52/67 (78%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +L  ++ +RRKPL+Y++NLIIPTSI TL++I GFFT ++ +  R EK+
Sbjct  138   EVKYECCPNKYTLLSITLYLRRKPLFYIINLIIPTSITTLIAIVGFFTTSTASGMREEKV  197

Query  2685  NLGITTV  2665
             +LGITT+
Sbjct  198   SLGITTL  204


 Score = 36.6 bits (83),  Expect(2) = 1e-16, Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 35/176 (20%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGR-RQYGKV  2408
             DQMPTTS FIPLIG             WF L++I II+ GT  +SVI++IQ R RQ  ++
Sbjct  216   DQMPTTSTFIPLIG-------------WFILAMITIITFGTLASSVIIAIQKRGRQKSRL  262

Query  2407  PPIYVRYWFFCKFTAWFCV-GVPPPLAVLWEELHVSQKKMLFYLKVILVRS*KSL*FRRL  2231
              P   R     KF A   +  +P  L     E H  +      LK I   + +    RR 
Sbjct  263   TP---RIVCLVKFIACIMLEDIPKHL----RETHEKE------LKTIPSLNEEGQHLRRT  309

Query  2230  AM*KKQSSFCTVQCLAFCTVQYSDGPDPVAKNVSFCIREMSKM*QNAGLR*LSPPR  2063
                K+    CT Q       Q S   +P    +S     +S    N G   LSP  
Sbjct  310   ---KQSEERCTKQAAILQRRQKSQAIEPYLCELS----TLSYNNNNNGTDLLSPKE  358


 Score = 71.2 bits (173),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 33/65 (51%), Positives = 45/65 (69%), Gaps = 0/65 (0%)
 Frame = -1

Query  9094  GWFILGMIIVISSGTLASSVVIAVQKKGRMGERLSCRAVKITRFFGYISISDVPLHLRKG  8915
             GWFIL MI +I+ GTLASSV+IA+QK+GR   RL+ R V + +F   I + D+P HLR+ 
Sbjct  229   GWFILAMITIITFGTLASSVIIAIQKRGRQKSRLTPRIVCLVKFIACIMLEDIPKHLRET  288

Query  8914  TKVSL  8900
              +  L
Sbjct  289   HEKEL  293


 Score = 68.9 bits (167),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (70%), Gaps = 0/56 (0%)
 Frame = -3

Query  4535  MSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             M LYQ++ V+EP Q++ +N W+I++W DE L W P DY  I    LPH+ IW+PDT
Sbjct  1     MDLYQILQVDEPQQYVLLNAWIIERWYDEFLYWRPEDYDNITEIHLPHSSIWLPDT  56


 Score = 65.5 bits (158),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 58/99 (59%), Positives = 67/99 (68%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +VK+ EVKY CCPN YTLL +TL+LRRKPLFY++NLIIPT+I TLIAIVGFFT      
Sbjct  132    TTVKKKEVKYECCPNKYTLLSITLYLRRKPLFYIINLIIPTSITTLIAIVGFFT------  185

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  TS+ASGMREEKVSLGITT+
Sbjct  186    --------------------TSTASGMREEKVSLGITTL  204


 Score = 59.7 bits (143),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 39/127 (31%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
 Frame = -1

Query  4357  WEGISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIR--ADTLFWEGRRGSHISFLY  4184
             ++ I+  H  P + I+     LYNS+VM  D+T R +N++  AD    E    ++I  LY
Sbjct  38    YDNITEIH-LPHSSIWLPDTTLYNSLVMKDDDTRRLLNVKLTAD----ENIHAAYIELLY  92

Query  4183  PAIYTVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFIPNEEWKVISF  4004
             P IY  +C LN+R+FP+D Q                       V   ++I NE W ++  
Sbjct  93    PTIYKFSCLLNLRFFPFDIQGNI--------------------VGTTNYIENEGWHILRT  132

Query  4003  KVFRHEV  3983
              V + EV
Sbjct  133   TVKKKEV  139


>gb|ACO48333.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.7 bits (195),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 47.8 bits (112),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48331.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.7 bits (195),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 31/78 (40%), Positives = 53/78 (68%), Gaps = 0/78 (0%)
 Frame = -3

Query  4601  GRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDY  4422
              RY+  + P +  +  +K+  SM LYQ+I VNEP QF+ +N W++++W D +L WDP ++
Sbjct  36    SRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEPQQFLMLNAWIVERWVDNLLGWDPEEF  95

Query  4421  SMINTTILPHNVIWIPDT  4368
             S +   ++P++ +WIPDT
Sbjct  96    SNVTEIMIPYDNLWIPDT  113


 Score = 80.1 bits (196),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 48/65 (74%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GF + +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFCSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 1e-13, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 44.3 bits (103),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 59/99 (60%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGF +      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFCS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACN56909.1|  ACR-23-like protein [Haemonchus contortus]
 gb|ACO48329.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
 gb|ACO48334.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.7 bits (195),  Expect(2) = 3e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 47.8 bits (112),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48330.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (424),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 99/132 (75%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 80.9 bits (198),  Expect(2) = 4e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.3 bits (194),  Expect(2) = 4e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLRNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 47.8 bits (112),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48353.1|  mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=447


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   165 bits (418),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 98/132 (74%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE  +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTETMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 81.6 bits (200),  Expect(2) = 9e-30, Method: Compositional matrix adjust.
 Identities = 37/104 (36%), Positives = 64/104 (62%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +  T++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTETMIPYDNLWIPDT  113


 Score = 80.9 bits (198),  Expect(2) = 9e-30, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 84.0 bits (206),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 1e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 48.1 bits (113),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACO48335.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   167 bits (422),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 76/132 (58%), Positives = 98/132 (74%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT     
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDE  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ELLYPTIYK SCLL+LR+FPFD+Q C +TF SWT+D   IDY  +  +  IG +N 
Sbjct  142    GALVELLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTFDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 79.7 bits (195),  Expect(2) = 8e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+  G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDEGALVELLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTFDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.3 bits (194),  Expect(2) = 8e-29, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 63/104 (61%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W++++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWIVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


 Score = 84.0 bits (206),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 40/65 (62%), Positives = 49/65 (75%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI GFF+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 9e-15, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 47.8 bits (112),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (61%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVGFF+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGFFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|ACN56913.1|  ACR-23-like protein [Haemonchus contortus]
 gb|ACO48332.1|  acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=564


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   164 bits (414),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 75/132 (57%), Positives = 97/132 (73%), Gaps = 2/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNF  10946
               AL+ LLYPTIYK SCLL+LR+FPFD+Q C +TF SWT D   IDY  +  +  IG +N 
Sbjct  142    GALVGLLYPTIYKLSCLLDLRFFPFDVQTCKLTFGSWTLDNTLIDYFPHNVTHAIGITNC  201

Query  10945  IENEGWYLFKTS  10910
              I+NEGW + +T+
Sbjct  202    IDNEGWTVLRTT  213


 Score = 81.6 bits (200),  Expect(2) = 2e-29, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGR-RGSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS+VM   +T R +N +  T    G+ +G+ +  LYP IY ++C L++R+FP+D Q C
Sbjct  115   LYNSLVMDDHDTRRLLNAKLTT---RGKDKGALVGLLYPTIYKLSCLLDLRFFPFDVQTC  171

Query  4117  TLTISSWTNSKSALDYY---ADPEVNMASFIPNEEWKVISFKVFRHEVSEFD  3971
              LT  SWT   + +DY+       + + + I NE W V+   V RH V+ +D
Sbjct  172   KLTFGSWTLDNTLIDYFPHNVTHAIGITNCIDNEGWTVLRTTVERH-VNHYD  222


 Score = 79.3 bits (194),  Expect(2) = 2e-29, Method: Compositional matrix adjust.
 Identities = 31/78 (40%), Positives = 53/78 (68%), Gaps = 0/78 (0%)
 Frame = -3

Query  4601  GRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDY  4422
              RY+  + P +  +  +K+  SM LYQ+I VNEP QF+ +N W++++W D +L WDP ++
Sbjct  36    SRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEPQQFLMLNAWIVERWVDNLLGWDPEEF  95

Query  4421  SMINTTILPHNVIWIPDT  4368
             S +   ++P++ +WIPDT
Sbjct  96    SNVTEIMIPYDNLWIPDT  113


 Score = 82.0 bits (201),  Expect(2) = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 48/65 (74%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
              Y CCP  + +LE  + I+RKPLYYV+NLI PTSIITL+SI G F+ +S  D R EKI L
Sbjct  220   HYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGLFSSSSINDLREEKITL  279

Query  2679  GITTV  2665
             GITT+
Sbjct  280   GITTL  284


 Score = 28.1 bits (61),  Expect(2) = 4e-14, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  296   DKMPSTSSFIPLIG  309


 Score = 45.4 bits (106),  Expect = 0.84, Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 59/99 (60%), Gaps = 26/99 (26%)
 Frame = -2

Query  10440  VSVKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*  10261
               +V+R    Y CCPNNYTLL   L ++RKPL+Y++NLI PT+IITLI+IVG F+      
Sbjct  212    TTVERHVNHYDCCPNNYTLLEFHLNIQRKPLYYVINLITPTSIITLISIVGLFS------  265

Query  10260  L*FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                                  +SS + +REEK++LGITT+
Sbjct  266    --------------------SSSINDLREEKITLGITTL  284


>gb|AAR98638.1|  acetylcholine receptor alternative variant b [Caenorhabditis 
elegans]
Length=459


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   158 bits (400),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 75/113 (66%), Positives = 87/113 (77%), Gaps = 2/113 (2%)
 Frame = -1

Query  11242  VRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRRAALIELLYPTIYKFSCLLN  11063
              + LPHH IWLPDTTLYNSLVMKDD+ RRLL+AK+TT      A IELLYPTIYK SCLLN
Sbjct  1      IMLPHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTLGEGNGAFIELLYPTIYKLSCLLN  60

Query  11062  LRYFPFDLQVCTMTFSSWTYDQKGIDYRAY--SEEIGTSNFIENEGWYLFKTS  10910
              LR+FPFD+Q C + F SWT+D   IDY A+  S+ IGT+N IENEGW +  TS
Sbjct  61     LRFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTS  113


 Score = 91.7 bits (226),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P  +I+     LYNS+VM  DE  R ++ +  TL  EG  G+ I  LYP IY ++C LN+
Sbjct  4     PHHFIWLPDTTLYNSLVMKDDENRRLLHAKVTTL-GEGN-GAFIELLYPTIYKLSCLLNL  61

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FP+D Q+C L   SWT   + +DY+A  E   +   + I NE W V+S  V RHE
Sbjct  62    RFFPFDVQSCRLLFGSWTFDNTKIDYFAFNESQAIGTTNCIENEGWNVLSTSVIRHE  118


 Score = 62.0 bits (149),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + KY CCP  + +LE  + I+RKPLYY++NLIIPTSIIT +SI GFF+ +S  + R EKI
Sbjct  118   ENKYDCCPNNYTLLEFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKI  177

Query  2685  NLGITTV  2665
              LGITT+
Sbjct  178   TLGITTL  184


 Score = 28.1 bits (61),  Expect(2) = 2e-08, Method: Compositional matrix adjust.
 Identities = 11/14 (79%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS FIPLIG
Sbjct  196   DKMPSTSSFIPLIG  209


>ref|NP_498437.2|  Protein ACR-5 [Caenorhabditis elegans]
 sp|P54246.4|ACR5_CAEEL  RecName: Full=Acetylcholine receptor subunit alpha-type acr-5; 
Flags: Precursor
 emb|CCD63926.1|  Protein ACR-5 [Caenorhabditis elegans]
Length=598

 GENE ID: 191596 acr-5 | Protein ACR-5 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   107 bits (268),  Expect(2) = 2e-36, Method: Compositional matrix adjust.
 Identities = 47/91 (52%), Positives = 69/91 (76%), Gaps = 0/91 (0%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q RL  ++L P  Y+  V P ++++RP ++ +SMSLYQ++DV+E  Q I++N+WM+Q W 
Sbjct  104   QRRLVEELLDPNYYEKTVHPKRDYTRPTRVNLSMSLYQILDVDEHMQSIEVNVWMVQHWY  163

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             DE LDW+P DY MIN TI+P++ IWIPDTY+
Sbjct  164   DEFLDWNPVDYGMINRTIVPYHQIWIPDTYL  194


 Score = 77.0 bits (188),  Expect(2) = 2e-36, Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 2/105 (2%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRR-GSHISFLYPAIYTVTCRLNIRYFPYDQQNC  4118
             LYNS  +   +TE  MN + +T  W  ++ G+ +  ++PAIY ++CR+++R+FPYD+QN 
Sbjct  194   LYNSEELEQKKTESLMNAQLETGHWNQKKDGAKVQLMFPAIYKLSCRMDVRWFPYDRQNY  253

Query  4117  TLTISSWTNSKSALDYYA-DPEVNMASFIPNEEWKVISFKVFRHE  3986
               +       +  +DY+     VN+ +   N+EW+VISF+  R E
Sbjct  254   KTSFKPMKLLQQTIDYWPLSSTVNLGNMARNDEWEVISFEFVRVE  298


 Score = 93.6 bits (231),  Expect(2) = 2e-21, Method: Compositional matrix adjust.
 Identities = 39/64 (61%), Positives = 54/64 (84%), Gaps = 0/64 (0%)
 Frame = -2

Query  2856  YACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINLG  2677
             + CC  PWV+L A +VIRRKPLYY++NL++PTSIIT+V++TGFFTP S++ +R EK+ LG
Sbjct  301   FKCCTAPWVMLYAHLVIRRKPLYYMINLVVPTSIITIVAVTGFFTPTSSSSERDEKLYLG  360

Query  2676  ITTV  2665
             I T+
Sbjct  361   INTL  364


 Score = 41.2 bits (95),  Expect(2) = 2e-21, Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 14/109 (13%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGKVP  2405
             +QMP+TS ++PL+              W+Y+ II++I +GTFL + +L+I G++ Y K  
Sbjct  376   NQMPSTSTYVPLMS-------------WYYIGIIMVIVVGTFLATGVLAIHGQKHYNKPI  422

Query  2404  PIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHV-SQKKMLFYLKVILVR  2261
                +R   +     +F +  P  L  LW E  V S+++   +L  +L++
Sbjct  423   SDRIRKLIYNPVVEFFILSPPTSLIDLWTEFGVISEQRHSTHLDPLLLQ  471


 Score =   107 bits (268),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 74/126 (59%), Gaps = 3/126 (2%)
 Frame = -1

Query  11296  WNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTT---NST  11126
              W DEFL WNP+DYG I    +P+H IW+PDT LYNS  ++   T  L+NA+L T   N  
Sbjct  162    WYDEFLDWNPVDYGMINRTIVPYHQIWIPDTYLYNSEELEQKKTESLMNAQLETGHWNQK  221

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
              +  A ++L++P IYK SC +++R+FP+D Q    +F      Q+ IDY   S  +   N 
Sbjct  222    KDGAKVQLMFPAIYKLSCRMDVRWFPYDRQNYKTSFKPMKLLQQTIDYWPLSSTVNLGNM  281

Query  10945  IENEGW  10928
                N+ W
Sbjct  282    ARNDEW  287


>ref|XP_003115414.1|  CRE-ACR-23 protein [Caenorhabditis remanei]
 gb|EFO99901.1|  CRE-ACR-23 protein [Caenorhabditis remanei]
Length=554

 GENE ID: 9839244 Cre-acr-23 | CRE-ACR-23 protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   152 bits (383),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 72/132 (55%), Positives = 92/132 (70%), Gaps = 3/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D+ L W P D+ N TE+ + H  +WLPDTTLYNSL M D  +++L + KLTT   RR
Sbjct  84     RWVDQMLGWEPEDFDNETEIMVRHDDVWLPDTTLYNSLEMDDSASKKLTHVKLTTLGKRR  143

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY--RAYSE-EIGTSN  10949
               A++ELLYPTIYK SCLLNLR+FPFD+Q C MTF SW++D   IDY  R +    IG +N
Sbjct  144    GAMVELLYPTIYKISCLLNLRFFPFDMQKCRMTFGSWSFDNSLIDYYPRHFKNGPIGLAN  203

Query  10948  FIENEGWYLFKT  10913
              F+EN+ W +  T
Sbjct  204    FLENDAWSVLVT  215


 Score = 83.2 bits (204),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 63/107 (59%), Gaps = 6/107 (6%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+ M    +++  +++  TL    RRG+ +  LYP IY ++C LN+R+FP+D Q C 
Sbjct  117   LYNSLEMDDSASKKLTHVKLTTL--GKRRGAMVELLYPTIYKISCLLNLRFFPFDMQKCR  174

Query  4114  LTISSWTNSKSALDYYA----DPEVNMASFIPNEEWKVISFKVFRHE  3986
             +T  SW+   S +DYY     +  + +A+F+ N+ W V+   V R E
Sbjct  175   MTFGSWSFDNSLIDYYPRHFKNGPIGLANFLENDAWSVLVTHVDRVE  221


 Score = 71.2 bits (173),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 32/97 (33%), Positives = 59/97 (61%), Gaps = 10/97 (10%)
 Frame = -3

Query  4628  RLTRDILGPGRYDIRVRPVQNHSR----------PLKIYISMSLYQLIDVNEPSQFIQMN  4479
             RLT +   P +Y++    ++N+ +          P+ + +S+ LYQ+I VNEP QF+ +N
Sbjct  19    RLTLNANLPIQYELANNILENYQKGLIPKVRKDSPINVTMSIQLYQIIQVNEPQQFLLLN  78

Query  4478  MWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              W++++W D+ML W+P D+      ++ H+ +W+PDT
Sbjct  79    AWVVERWVDQMLGWEPEDFDNETEIMVRHDDVWLPDT  115


 Score = 79.0 bits (193),  Expect(2) = 5e-12, Method: Compositional matrix adjust.
 Identities = 42/94 (45%), Positives = 55/94 (59%), Gaps = 11/94 (12%)
 Frame = -2

Query  2913  LRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSIT  2734
             L  +     +   D  + KYACCP  + +L   +VI+RKPLYYV+NLI PT++IT +SI 
Sbjct  205   LENDAWSVLVTHVDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISII  264

Query  2733  GFFT-----------PASTADDRTEKINLGITTV  2665
             GFFT            +S  D R EKI LGITT+
Sbjct  265   GFFTSVNPFTNFCNVSSSVHDLRQEKITLGITTL  298


 Score = 23.5 bits (49),  Expect(2) = 5e-12, Method: Compositional matrix adjust.
 Identities = 9/14 (64%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS  +PLIG
Sbjct  310   DKMPSTSTCVPLIG  323


 Score = 50.1 bits (118),  Expect = 0.032, Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 62/97 (64%), Gaps = 15/97 (15%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              V R E KY+CCP NYT+L   + ++RKPL+Y++NLI PTA+IT I+I+GFFT V      
Sbjct  217    VDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSV------  270

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                 NP +           +SS   +R+EK++LGITT+
Sbjct  271    ---NPFT------NFCNVSSSVHDLRQEKITLGITTL  298


>gb|EGT56973.1|  hypothetical protein CAEBREN_09028 [Caenorhabditis brenneri]
Length=537


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   149 bits (375),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D+ L W+P ++ N T++ + H  +WLPDTTLYNSL M D  +++L + KLTT   +R
Sbjct  67     RWIDQMLGWDPEEFDNETDIMVRHDDVWLPDTTLYNSLEMDDSASKKLTHVKLTTLGKKR  126

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY--RAYSE-EIGTSN  10949
               A++ELLYPTIYK SCLLNLR+FPFD+Q C MTF SW++D   IDY  R ++   IG +N
Sbjct  127    GAMVELLYPTIYKISCLLNLRFFPFDMQKCRMTFGSWSFDNSLIDYYPRHFANGPIGLAN  186

Query  10948  FIENEGWYLFKT  10913
              F+EN+ W +  T
Sbjct  187    FLENDAWSVLVT  198


 Score = 84.0 bits (206),  Expect(2) = 8e-19, Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 64/107 (60%), Gaps = 6/107 (6%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+ M    +++  +++  TL    +RG+ +  LYP IY ++C LN+R+FP+D Q C 
Sbjct  100   LYNSLEMDDSASKKLTHVKLTTL--GKKRGAMVELLYPTIYKISCLLNLRFFPFDMQKCR  157

Query  4114  LTISSWTNSKSALDYY----ADPEVNMASFIPNEEWKVISFKVFRHE  3986
             +T  SW+   S +DYY    A+  + +A+F+ N+ W V+   V R E
Sbjct  158   MTFGSWSFDNSLIDYYPRHFANGPIGLANFLENDAWSVLVTHVDRVE  204


 Score = 42.0 bits (97),  Expect(2) = 8e-19, Method: Compositional matrix adjust.
 Identities = 27/97 (28%), Positives = 42/97 (43%), Gaps = 17/97 (18%)
 Frame = -3

Query  4658  GLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMN  4479
              L  D   Q  L   IL    Y   + P      P+ + +S+ LYQ+I V          
Sbjct  19    SLNEDLPIQYELANSILE--NYQKGLIPKVKKGSPINVTVSIQLYQIIQV----------  66

Query  4478  MWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
                  +W D+ML WDP ++      ++ H+ +W+PDT
Sbjct  67    -----RWIDQMLGWDPEEFDNETDIMVRHDDVWLPDT  98


 Score = 79.0 bits (193),  Expect(2) = 6e-12, Method: Compositional matrix adjust.
 Identities = 42/94 (45%), Positives = 55/94 (59%), Gaps = 11/94 (12%)
 Frame = -2

Query  2913  LRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSIT  2734
             L  +     +   D  + KYACCP  + +L   +VI+RKPLYYV+NLI PT++IT +SI 
Sbjct  188   LENDAWSVLVTHVDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISII  247

Query  2733  GFFT-----------PASTADDRTEKINLGITTV  2665
             GFFT            +S  D R EKI LGITT+
Sbjct  248   GFFTSVNPFTNFCNVSSSVHDLRQEKITLGITTL  281


 Score = 23.5 bits (49),  Expect(2) = 6e-12, Method: Compositional matrix adjust.
 Identities = 9/14 (64%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS  +PLIG
Sbjct  293   DKMPSTSTCVPLIG  306


 Score = 50.1 bits (118),  Expect = 0.035, Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 62/97 (64%), Gaps = 15/97 (15%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              V R E KY+CCP NYT+L   + ++RKPL+Y++NLI PTA+IT I+I+GFFT V      
Sbjct  200    VDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSV------  253

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                 NP +           +SS   +R+EK++LGITT+
Sbjct  254    ---NPFT------NFCNVSSSVHDLRQEKITLGITTL  281


>gb|EGT38487.1|  hypothetical protein CAEBREN_00067 [Caenorhabditis brenneri]
Length=552


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   148 bits (374),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D+ L W+P ++ N T++ + H  +WLPDTTLYNSL M D  +++L + KLTT   +R
Sbjct  82     RWIDQMLGWDPEEFDNETDIMVRHDDVWLPDTTLYNSLEMDDSASKKLTHVKLTTLGKKR  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY--RAYSE-EIGTSN  10949
               A++ELLYPTIYK SCLLNLR+FPFD+Q C MTF SW++D   IDY  R ++   IG +N
Sbjct  142    GAMVELLYPTIYKISCLLNLRFFPFDMQKCRMTFGSWSFDNSLIDYYPRHFANGPIGLAN  201

Query  10948  FIENEGWYLFKT  10913
              F+EN+ W +  T
Sbjct  202    FLENDAWSVLVT  213


 Score = 84.0 bits (206),  Expect(2) = 1e-27, Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 64/107 (60%), Gaps = 6/107 (6%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNS+ M    +++  +++  TL    +RG+ +  LYP IY ++C LN+R+FP+D Q C 
Sbjct  115   LYNSLEMDDSASKKLTHVKLTTL--GKKRGAMVELLYPTIYKISCLLNLRFFPFDMQKCR  172

Query  4114  LTISSWTNSKSALDYY----ADPEVNMASFIPNEEWKVISFKVFRHE  3986
             +T  SW+   S +DYY    A+  + +A+F+ N+ W V+   V R E
Sbjct  173   MTFGSWSFDNSLIDYYPRHFANGPIGLANFLENDAWSVLVTHVDRVE  219


 Score = 71.2 bits (173),  Expect(2) = 1e-27, Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (56%), Gaps = 2/97 (2%)
 Frame = -3

Query  4658  GLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMN  4479
              L  D   Q  L   IL    Y   + P      P+ + +S+ LYQ+I VNEP QF+ +N
Sbjct  19    SLNEDLPIQYELANSILE--NYQKGLIPKVKKGSPINVTVSIQLYQIIQVNEPQQFLLLN  76

Query  4478  MWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              W++++W D+ML WDP ++      ++ H+ +W+PDT
Sbjct  77    AWVVERWIDQMLGWDPEEFDNETDIMVRHDDVWLPDT  113


 Score = 79.0 bits (193),  Expect(2) = 6e-12, Method: Compositional matrix adjust.
 Identities = 42/94 (45%), Positives = 55/94 (59%), Gaps = 11/94 (12%)
 Frame = -2

Query  2913  LRTEVSLFCICDFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSIT  2734
             L  +     +   D  + KYACCP  + +L   +VI+RKPLYYV+NLI PT++IT +SI 
Sbjct  203   LENDAWSVLVTHVDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISII  262

Query  2733  GFFT-----------PASTADDRTEKINLGITTV  2665
             GFFT            +S  D R EKI LGITT+
Sbjct  263   GFFTSVNPFTNFCNVSSSVHDLRQEKITLGITTL  296


 Score = 23.5 bits (49),  Expect(2) = 6e-12, Method: Compositional matrix adjust.
 Identities = 9/14 (64%), Positives = 12/14 (86%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS  +PLIG
Sbjct  308   DKMPSTSTCVPLIG  321


 Score = 50.1 bits (118),  Expect = 0.032, Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 62/97 (64%), Gaps = 15/97 (15%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              V R E KY+CCP NYT+L   + ++RKPL+Y++NLI PTA+IT I+I+GFFT V      
Sbjct  215    VDRVEKKYACCPVNYTMLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSV------  268

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                 NP +           +SS   +R+EK++LGITT+
Sbjct  269    ---NPFT------NFCNVSSSVHDLRQEKITLGITTL  296


>ref|NP_504024.2|  Protein ACR-23 [Caenorhabditis elegans]
 gb|AAR89634.1|  acetylcholine receptor (62.5 kD) (acr-23) [Caenorhabditis elegans]
 emb|CCD72123.1|  Protein ACR-23 [Caenorhabditis elegans]
Length=545

 GENE ID: 191606 acr-23 | Protein ACR-23 [Caenorhabditis elegans]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   147 bits (370),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 91/132 (69%), Gaps = 3/132 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D+ L W+P ++ N TE+   H  IWLPDTTLYNSL M D  +++L + KLTT    +
Sbjct  82     RWVDQMLGWDPSEFDNETEIMARHDDIWLPDTTLYNSLEMDDSASKKLTHVKLTTLGKNQ  141

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY--RAYSE-EIGTSN  10949
               A++ELLYPTIYK SCLLNL+YFPFD Q C MTF SW++D   IDY  R ++   IG +N
Sbjct  142    GAMVELLYPTIYKISCLLNLKYFPFDTQTCRMTFGSWSFDNSLIDYFPRTFTNGPIGLAN  201

Query  10948  FIENEGWYLFKT  10913
              F+EN+ W +  T
Sbjct  202    FLENDAWSVLGT  213


 Score = 82.0 bits (201),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 42/125 (34%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
 Frame = -1

Query  4348  ISAAHDTPLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYT  4169
             I A HD     I+     LYNS+ M    +++  +++  TL     +G+ +  LYP IY 
Sbjct  101   IMARHDD----IWLPDTTLYNSLEMDDSASKKLTHVKLTTL--GKNQGAMVELLYPTIYK  154

Query  4168  VTCRLNIRYFPYDQQNCTLTISSWTNSKSALDY----YADPEVNMASFIPNEEWKVISFK  4001
             ++C LN++YFP+D Q C +T  SW+   S +DY    + +  + +A+F+ N+ W V+  K
Sbjct  155   ISCLLNLKYFPFDTQTCRMTFGSWSFDNSLIDYFPRTFTNGPIGLANFLENDAWSVLGTK  214

Query  4000  VFRHE  3986
             V R E
Sbjct  215   VNREE  219


 Score = 75.5 bits (184),  Expect(2) = 2e-10, Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 11/78 (14%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFT-----------P  2719
             + KY CCP  + +L   +VI+RKPLYYV+NLI PT++IT +SI GFFT            
Sbjct  219   EKKYTCCPVNYTLLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSVNPFTNFCNVS  278

Query  2718  ASTADDRTEKINLGITTV  2665
             +S  D R EKI LGITT+
Sbjct  279   SSVHDLRQEKITLGITTL  296


 Score = 21.6 bits (44),  Expect(2) = 2e-10, Method: Compositional matrix adjust.
 Identities = 8/14 (57%), Positives = 11/14 (79%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             D+MP+TS  +PLI 
Sbjct  308   DKMPSTSTCVPLIA  321


 Score = 68.6 bits (166),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 31/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = -3

Query  4634  QVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEPSQFIQMNMWMIQKWE  4455
             Q  L  +I+    Y   + P      P+ + +S+ LYQ+I VNEP Q++ +N W +++W 
Sbjct  27    QYELANNIME--NYQKGLIPKVRKGSPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWV  84

Query  4454  DEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             D+ML WDP ++      +  H+ IW+PDT
Sbjct  85    DQMLGWDPSEFDNETEIMARHDDIWLPDT  113


 Score = 52.0 bits (123),  Expect = 0.009, Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 63/97 (65%), Gaps = 15/97 (15%)
 Frame = -2

Query  10434  VKRDEVKYSCCPNNYtllrltlflrRKPLFYLVNliiptaiitliaIVGFFT*VQGI*L*  10255
              V R+E KY+CCP NYTLL   + ++RKPL+Y++NLI PTA+IT I+I+GFFT V      
Sbjct  215    VNREEKKYTCCPVNYTLLHYDVVIQRKPLYYVLNLIAPTAVITFISIIGFFTSV------  268

Query  10254  FLRNPISItfftffkffrTSSASGMREEKVSLGITTV  10144
                 NP +           +SS   +R+EK++LGITT+
Sbjct  269    ---NPFT------NFCNVSSSVHDLRQEKITLGITTL  296


>ref|XP_003095532.1|  hypothetical protein CRE_17510 [Caenorhabditis remanei]
 gb|EFO89146.1|  hypothetical protein CRE_17510 [Caenorhabditis remanei]
Length=573

 GENE ID: 9813056 CRE_17510 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   130 bits (328),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/117 (53%), Positives = 84/117 (72%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P   I+     LYNSVVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+I
Sbjct  111   PFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDI  170

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FPYDQQ C LTISSWT+SKS ++Y  +PE   VNM +F+PNEEW V+SF + R E
Sbjct  171   RFFPYDQQACKLTISSWTSSKSDINY--EPEYESVNMDNFLPNEEWVVVSFNIKRVE  225


 Score =   104 bits (260),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  225   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  284

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  285   SLGIDSL  291


 Score = 48.1 bits (113),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 51/95 (54%), Gaps = 15/95 (16%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  303   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  349

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS  2303
              PI V Y FF +   W  +  P  L  LW E  V+
Sbjct  350   SPI-VSYIFFGRIAQWLRMRPPTMLLELWNETGVT  383


 Score =   128 bits (322),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 2/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  89     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  148

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  149    EKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEYESVNMDNF  208

Query  10945  IENEGWYL  10922
              + NE W +
Sbjct  209    LPNEEWVV  216


 Score =   122 bits (306),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 56/122 (46%), Positives = 78/122 (64%), Gaps = 3/122 (2%)
 Frame = -3

Query  4718  LVKIFNNFFNLPASSADPRDGLKHDQ---VPQVRLTRDILGPGRYDIRVRPVQNHSRPLK  4548
             +V +   F  +       R+ L  D    +P +RL +D++ P RYD RVRPV NHS+P  
Sbjct  1     MVGVVGWFMVIIGVVLGAREALMDDYGEFLPHIRLAKDLMDPRRYDSRVRPVMNHSKPTT  60

Query  4547  IYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             +  SMSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDT
Sbjct  61    VSFSMSLYQILSINEKQQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDT  120

Query  4367  YV  4362
             Y+
Sbjct  121   YL  122


>gb|EGT42046.1|  CBN-ACR-24 protein [Caenorhabditis brenneri]
Length=574


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   130 bits (327),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/117 (53%), Positives = 84/117 (72%), Gaps = 5/117 (4%)
 Frame = -1

Query  4327  PLTYIFFNFFQLYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNI  4148
             P   I+     LYNSVVM  +ETERY+N+   T +W+G +G+ + F+YPA+Y  +C L+I
Sbjct  111   PFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKGEKGAEVKFMYPALYRTSCLLDI  170

Query  4147  RYFPYDQQNCTLTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             R+FPYDQQ C LTISSWT+SKS ++Y  +PE   VNM +F+PNEEW V+SF + R E
Sbjct  171   RFFPYDQQACKLTISSWTSSKSDINY--EPEYESVNMDNFLPNEEWVVVSFNIKRVE  225


 Score =   104 bits (259),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  225   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  284

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  285   SLGIDSL  291


 Score = 48.1 bits (113),  Expect(2) = 7e-27, Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 51/95 (54%), Gaps = 15/95 (16%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  303   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  349

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS  2303
              PI V Y FF +   W  +  P  L  LW E  V+
Sbjct  350   SPI-VSYIFFGRIAHWLHMRPPTMLLELWNETGVT  383


 Score =   128 bits (322),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 2/128 (2%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--ST  11126
              +WND+FL WNP  YG I    LP   IWLPDT LYNS+VM  ++T R +N  +TTN    
Sbjct  89     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYINVVVTTNYWKG  148

Query  11125  RRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNF  10946
               + A ++ +YP +Y+ SCLL++R+FP+D Q C +T SSWT  +  I+Y    E +   NF
Sbjct  149    EKGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYEPEYESVNMDNF  208

Query  10945  IENEGWYL  10922
              + NE W +
Sbjct  209    LPNEEWVV  216


 Score =   122 bits (307),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 78/122 (64%), Gaps = 3/122 (2%)
 Frame = -3

Query  4718  LVKIFNNFFNLPASSADPRDGLKHDQ---VPQVRLTRDILGPGRYDIRVRPVQNHSRPLK  4548
             + ++   F  +       R+ L  D    +P +RL +D++ P RYD RVRPV NHS+P  
Sbjct  1     MARVVGWFMTIIGVVIGAREALMDDYGEFLPHIRLAKDLMDPRRYDSRVRPVMNHSKPTT  60

Query  4547  IYISMSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
             +  SMSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDT
Sbjct  61    VSFSMSLYQILSINEKQQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDT  120

Query  4367  YV  4362
             Y+
Sbjct  121   YL  122


>ref|XP_003089071.1|  hypothetical protein CRE_21069 [Caenorhabditis remanei]
 gb|EFO87380.1|  hypothetical protein CRE_21069 [Caenorhabditis remanei]
Length=311

 GENE ID: 9814184 CRE_21069 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   105 bits (263),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  12    EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  71

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  72    SLGIDSL  78


 Score = 48.1 bits (113),  Expect(2) = 3e-27, Method: Compositional matrix adjust.
 Identities = 45/113 (40%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  90    EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  136

Query  2407  PPIYVRYWFFCKFTAWFCVGVPPPLAVLWEELHVS-QKKMLFYLKVILVRS*K  2252
              PI V Y FF +   W  +  P  L  LW E  V+  KK    LK + +++ K
Sbjct  137   SPI-VSYIFFGRIAQWLRMRPPTMLLELWNETGVTFGKKDKMKLKRVEMKNQK  188


>ref|XP_003089007.1|  hypothetical protein CRE_22231 [Caenorhabditis remanei]
 gb|EFO87530.1|  hypothetical protein CRE_22231 [Caenorhabditis remanei]
Length=516

 GENE ID: 9814039 CRE_22231 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 80.9 bits (198),  Expect(2) = 1e-26, Method: Compositional matrix adjust.
 Identities = 33/58 (57%), Positives = 44/58 (76%), Gaps = 0/58 (0%)
 Frame = -3

Query  4535  MSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             MSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDTY+
Sbjct  1     MSLYQILSINEKQQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYL  58


 Score = 71.2 bits (173),  Expect(2) = 1e-26, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 49/77 (64%), Gaps = 12/77 (16%)
 Frame = -1

Query  4264  ETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCTLTISSWTNSK  4085
             +TERY+N+   T +W+G +G+ + F+YPA++          FPY QQ C LTISSWT+SK
Sbjct  70    KTERYINVVVTTSYWKGEKGAEVKFMYPALF----------FPYGQQACKLTISSWTSSK  119

Query  4084  SALDYYADPEVNMASFI  4034
             S ++Y  +PE     F+
Sbjct  120   SDINY--EPEYESEKFV  134


 Score =   104 bits (260),  Expect(2) = 8e-24, Method: Compositional matrix adjust.
 Identities = 44/65 (68%), Positives = 59/65 (91%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
             K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK++L
Sbjct  132   KFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKLSL  191

Query  2679  GITTV  2665
             GI ++
Sbjct  192   GIDSL  196


 Score = 37.7 bits (86),  Expect(2) = 8e-24, Method: Compositional matrix adjust.
 Identities = 33/74 (45%), Positives = 43/74 (58%), Gaps = 15/74 (20%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  208   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  254

Query  2407  PPIYVRYWFFCKFT  2366
              PI V Y FF + +
Sbjct  255   SPI-VSYIFFGRVS  267


 Score = 80.1 bits (196),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 59/110 (54%), Gaps = 14/110 (13%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYN--SLVMKDDDTRRLLNAKLTTN--  11132
              +WND+FL WNP  YG I    LP   IWLPDT LYN   L+  +  T R +N  +TT+  
Sbjct  25     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNRWGLMNYEKKTERYINVVVTTSYW  84

Query  11131  STRRAALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY  10982
                 + A ++ +YP +          +FP+  Q C +T SSWT  +  I+Y
Sbjct  85     KGEKGAEVKFMYPAL----------FFPYGQQACKLTISSWTSSKSDINY  124


>ref|XP_002648071.1|  Hypothetical protein CBG24089 [Caenorhabditis briggsae]
Length=272

 GENE ID: 8590073 CBG24089 | Hypothetical protein CBG24089
[Caenorhabditis briggsae] (10 or fewer PubMed links)

 Score =   120 bits (300),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 55/95 (58%), Positives = 78/95 (82%), Gaps = 2/95 (2%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+AD RD +    VP +RLTR +L P RYD+RVRP+ +H + LK++IS+SLYQ+I+V+EP
Sbjct  42    STAD-RD-IAMQNVPLIRLTRHLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEP  99

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILP  4395
             SQ I++N+WMIQKW+DE LDW+P ++ MIN+TI+P
Sbjct  100   SQNIKLNVWMIQKWKDEYLDWNPNEFGMINSTIIP  134


>ref|XP_003088467.1|  hypothetical protein CRE_30609 [Caenorhabditis remanei]
 gb|EFO91139.1|  hypothetical protein CRE_30609 [Caenorhabditis remanei]
Length=518

 GENE ID: 9820134 CRE_30609 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   116 bits (291),  Expect(2) = 4e-25, Method: Compositional matrix adjust.
 Identities = 55/106 (52%), Positives = 78/106 (74%), Gaps = 6/106 (6%)
 Frame = -1

Query  4294  LYNSVVMAADETERYMNIRADTLFWEGRRGSHISFLYPAIYTVTCRLNIRYFPYDQQNCT  4115
             LYNSVVM  +ETERY+N+   T +W G +G+ + F++ ++Y  +C L+IR++PYDQQ C 
Sbjct  70    LYNSVVMNREETERYINVVVTTNYWNGEKGAEVKFMF-SLYRTSCLLDIRFYPYDQQACK  128

Query  4114  LTISSWTNSKSALDYYADPE---VNMASFIPNEEWKVISFKVFRHE  3986
             LT+SSWT SKS ++Y  +PE   VNM +F+PNEEW V+SF + R E
Sbjct  129   LTMSSWTLSKSDINY--EPEYESVNMDNFLPNEEWVVVSFNIKRVE  172


 Score = 30.0 bits (66),  Expect(2) = 4e-25, Method: Compositional matrix adjust.
 Identities = 22/92 (24%), Positives = 33/92 (36%), Gaps = 46/92 (50%)
 Frame = -3

Query  4568  NHSRPLKIYISMSLYQLIDV-----------------------NEPSQFIQMNMWMIQKW  4458
             +HS+P  +  SMSLYQ++ +                       NE  Q + +N W IQ  
Sbjct  2     SHSKPTTVSFSMSLYQILSIVSLIYMLYKLFTNICFTESTFIQNEKQQNVDLNAWAIQMM  61

Query  4457  EDEMLDWDPRDYSMINTTILPHNVIWIPDTYV  4362
             +                       IW+PDTY+
Sbjct  62    Q-----------------------IWLPDTYL  70


 Score =   105 bits (261),  Expect(2) = 3e-21, Method: Compositional matrix adjust.
 Identities = 44/67 (66%), Positives = 60/67 (90%), Gaps = 0/67 (0%)
 Frame = -2

Query  2865  QYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKI  2686
             + K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK+
Sbjct  172   EEKFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKL  231

Query  2685  NLGITTV  2665
             +LGI ++
Sbjct  232   SLGIDSL  238


 Score = 28.5 bits (62),  Expect(2) = 3e-21, Method: Compositional matrix adjust.
 Identities = 10/14 (71%), Positives = 13/14 (93%), Gaps = 0/14 (0%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIG  2543
             +QMPT+SDF+PL G
Sbjct  250   EQMPTSSDFVPLFG  263


 Score = 93.2 bits (230),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 67/102 (66%), Gaps = 3/102 (3%)
 Frame = -1

Query  11221  IWLPDTTLYNSLVMKDDDTRRLLNAKLTTN--STRRAALIELLYPTIYKFSCLLNLRYFP  11048
              IWLPDT LYNS+VM  ++T R +N  +TTN  +  + A ++ ++ ++Y+ SCLL++R++P
Sbjct  63     IWLPDTYLYNSVVMNREETERYINVVVTTNYWNGEKGAEVKFMF-SLYRTSCLLDIRFYP  121

Query  11047  FDLQVCTMTFSSWTYDQKGIDYRAYSEEIGTSNFIENEGWYL  10922
              +D Q C +T SSWT  +  I+Y    E +   NF+ NE W +
Sbjct  122    YDQQACKLTMSSWTLSKSDINYEPEYESVNMDNFLPNEEWVV  163


>gb|ACN56914.1|  mutant ACR-23-like protein [Haemonchus contortus]
 gb|ACO48359.1|  mutant acetylcholine receptor monepantel-1 [Haemonchus contortus]
Length=165


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   114 bits (285),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 0/81 (0%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              RW D  L W+P ++ N+TE+ +P+  +W+PDTTLYNSLVM D DTRRLLNAKLTT    +
Sbjct  82     RWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDTTLYNSLVMDDHDTRRLLNAKLTTRGKDK  141

Query  11119  AALIELLYPTIYKFSCLLNLR  11057
               AL+ELLYPTIYK SCLL+LR
Sbjct  142    GALVELLYPTIYKLSCLLDLR  162


 Score = 77.8 bits (190),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 36/104 (35%), Positives = 62/104 (60%), Gaps = 1/104 (1%)
 Frame = -3

Query  4679  SSADPRDGLKHDQVPQVRLTRDILGPGRYDIRVRPVQNHSRPLKIYISMSLYQLIDVNEP  4500
             S+   R      +VP+  L  + +   RY+  + P +  +  +K+  SM LYQ+I VNEP
Sbjct  11    STLFSRSEAISTEVPEHYLITNFI-LSRYNKGLIPKRLQNESIKVSFSMELYQIIQVNEP  69

Query  4499  SQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDT  4368
              QF+ +N W +++W D +L WDP ++S +   ++P++ +WIPDT
Sbjct  70    QQFLMLNAWSVERWVDNLLGWDPEEFSNVTEIMIPYDNLWIPDT  113


>ref|XP_003089733.1|  hypothetical protein CRE_17673 [Caenorhabditis remanei]
 gb|EFP13073.1|  hypothetical protein CRE_17673 [Caenorhabditis remanei]
Length=391

 GENE ID: 9827332 CRE_17673 | hypothetical protein [Caenorhabditis remanei]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =   103 bits (258),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 44/65 (68%), Positives = 59/65 (91%), Gaps = 0/65 (0%)
 Frame = -2

Query  2859  KYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADDRTEKINL  2680
             K+ CCPEPWV+LEA +V+RRKPLYY+VNL+IPTS+ITLV++TGFFT AST+ +R EK++L
Sbjct  94    KFVCCPEPWVLLEAVLVVRRKPLYYIVNLVIPTSVITLVAVTGFFTAASTSSERREKLSL  153

Query  2679  GITTV  2665
             GI ++
Sbjct  154   GIDSL  158


 Score = 37.4 bits (85),  Expect(2) = 2e-23, Method: Compositional matrix adjust.
 Identities = 33/74 (45%), Positives = 43/74 (58%), Gaps = 15/74 (20%)
 Frame = -1

Query  2584  DQMPTTSDFIPLIGKRssfsnk*ffsawFYLsiiiiisIGTFLTSVILSIQGRRQYGK-V  2408
             +QMPT+SDF+PL G              FYLSII II IGT  T+ IL++  ++ Y K V
Sbjct  170   EQMPTSSDFVPLFG-------------IFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPV  216

Query  2407  PPIYVRYWFFCKFT  2366
              PI V Y FF + +
Sbjct  217   SPI-VSYIFFGRVS  229


 Score = 80.5 bits (197),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (68%), Gaps = 5/71 (7%)
 Frame = -3

Query  4535  MSLYQLIDVNEPSQFIQMNMWMIQKWEDEMLDWDPRDYSMINTTILPHNVIWIPDTYVS-  4359
             MSLYQ++ +NE  Q + +N+W IQKW D+ L W+P  Y MINTTILP + IW+PDTY+  
Sbjct  1     MSLYQILSINEKQQNVDLNVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYN  60

Query  4358  ----LGRHFCR  4338
                  G+  C+
Sbjct  61    RFFPYGQQACK  71


 Score = 58.5 bits (140),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 41/106 (39%), Gaps = 44/106 (42%)
 Frame = -1

Query  11299  RWNDEFLYWNPMDYGNITEVRLPHHCIWLPDTTLYNSLVMKDDDTRRLLNAKLTTNSTRR  11120
              +WND+FL WNP  YG I    LP   IWLPDT LYN                        
Sbjct  25     KWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYN------------------------  60

Query  11119  AALIELLYPTIYKFSCLLNLRYFPFDLQVCTMTFSSWTYDQKGIDY  10982
                                  R+FP+  Q C +T SSWT  +  I+Y
Sbjct  61     --------------------RFFPYGQQACKLTISSWTSSKSDINY  86


 Score = 45.8 bits (107),  Expect = 0.54, Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (63%), Gaps = 2/51 (4%)
 Frame = -1

Query  4186  YPAIYTVTCRLNIRYFPYDQQNCTLTISSWTNSKSALDYYADPEVNMASFI  4034
             + AI+     L  R+FPY QQ C LTISSWT+SKS ++Y  +PE     F+
Sbjct  48    FDAIWLPDTYLYNRFFPYGQQACKLTISSWTSSKSDINY--EPEYESEKFV  96


>gb|ADN33419.1|  ACR-5-like protein [Haemonchus contortus]
Length=585

 Score = 99.4 bits (246),  Expect(2) = 3e-23, Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 58/72 (81%), Gaps = 0/72 (0%)
 Frame = -2

Query  2880  DFDLFQYKYACCPEPWVILEASIVIRRKPLYYVVNLIIPTSIITLVSITGFFTPASTADD  2701
             +F+  +  + CC  PWV+L A +VIRRKPLYYV+NL+IPTSIIT+V+ITGFFTP ST+ +
Sbjct  286   EFERIEQIFKCCANPWVLLYAHLVIRRKPLYYVINLVIPTSIITIVAITGFFTPTSTSSE  345

Query  2700  RTEKINLGITTV  2665
             R EK+ LGI T+
Sbjct  346   RDEKLYLGINTL  357
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emb|CADV01009238| (23971 letters)

Graphic Summary

Distribution of 597 Blast Hits on the Query Sequence [?]

Descriptions

Alignments
