Mikaël
Salson
Associate professor of computer science
mikael.salson@lifl.fr
+33 3 59 57 79 09
Positions
Since September 2010, I am part of the bioinformatics research group
Bonsai
(
LIFL
laboratory –
Université Lille 1
and
CNRS
;
INRIA Lille - Nord Europe
). You could find me wandering around
office 16 in the INRIA
or around
office 229 in the M3 extension building
.
I prepared my PhD thesis from september 2007 to december 2009 at the
university of Rouen
in the
TIBS
group of the
LITIS
laboratory.
Teaching
2010–2012
Introduction to programming
(First year bachelor)
Coding and information theory
(Second year bachelor –
MIMP
)
C programming
(Third year bachelor –
MIMP
)
Research
Research interests
My research interests are mainly (but not restricted to) the following ones
Bioinformatics
Algorithms for processing read sequences from
high-throughput sequencing technologies
. Mutation and variation detections.
Searching and identifying
non proteing coding RNAs
Stringology
Dynamic compressed text indexes (
suffix tree
,
suffix array
,
Burrows-Wheeler transform
)
Range minimum query
Publications
See my
publication list
Talks given
See the
list of my talks
Softwares
A dynamic and compressed full-text index implementation
A C++ library for indexing reads produced by high-throughput sequencers
Contact
INRIA Lille-Nord Europe
Parc scientifique de la haute borne
Park Plaza Bât. A
40 Avenue Halley
59650 Villeneuve d'Ascq
+33 3 59 57 79 09
Université Lille 1 – LIFL
Bâtiment M3 – Cité scientifique
59655 Villeneuve d'Ascq Cedex - France
+33 3 28 77 85 54
