Hélène Touzet

Senior researcher, CNRS

Bioinformatics group BONSAI at LIFL and INRIA - Lille Nord Europe

Head of the PPF Bioinformatique

LIFL - Bâtiment M3 Cité scientifique 59655 Villeneuve d'Ascq Cedex France

Phone : +33 (0)3 28 77 85 59 Email : helene.touzet[AT]lifl.fr

Research interests

• algorithms for computational biology
• high throughput sequencing data analysis
• noncoding RNAs

Some ongoing projects

• ANR MAPPI
• RNAspace, the non-coding RNA annotation platform
• bioinfo.lifl.fr, software for sequence analysis:
  carnac, gardenia, regliss, sortmeRNA for noncoding RNA analysis
  TFM-suite for transcription factor binding sites
• biomanycores, open source manycores bioinformatics

Publications

• If you are a bioinformatician, see pubmed
• If you are a computer scientist, see DBLP

Current PhD students

• Christophe Vroland: computational models for miRNAs in plant genomes
  (together with Mikael Salson and Vincent Castric)
• Jenya Kopylova: mapping algorithms for metagenomics and metatranscriptomics
  (together with Laurent Noé)

Teaching

All documents are in French. Some may be old.

• Computational Biology - master recherche informatique
• Introduction to regulatory sequence analysis - master recherche Biologie et Santé
• Bioinformatics - licence and master informatique
• Programmation en ADA - licence MIAGE
• Algorithmique - licence MIAGE
• Analyse de séquences - DESS Bioinformatique
• Génétique et Bioinformatique - DEUG SV2
• Bioinformatique - maîtrise d'informatique

Good resolutions

• do what I love
• have my kids eating fruits and veggies