Matrice Blosum 62


Ala A     4
Arg R    -1   5
Asn N    -2   0   6
Asp D    -2  -2   1   6
Cys C     0  -3  -3  -3   9
Gln Q    -1   1   0   0  -3   5
Glu E    -1   0   0   2  -4   2   5
Gly G     0  -2   0  -1  -3  -2  -2   6
His H    -2   0   1  -1  -3   0   0  -2   8
Ile I    -1  -3  -3  -3  -1  -3  -3  -4  -3   4
Leu L    -1  -2  -3  -4  -1  -2  -3  -4  -3   2   4
Lys K    -1   2   0  -1  -3   1   1  -2  -1  -3  -2   5
Met M    -1  -1  -2  -3  -1   0  -2  -3  -2   1   2  -1   5
Phe F    -2  -3  -3  -3  -2  -3  -3  -3  -1   0   0  -3   0   6
Pro P    -1  -2  -2  -1  -3  -1  -1  -2  -2  -3  -3  -1  -2  -4   7
Ser S     1  -1   1   0  -1   0   0   0  -1  -2  -2   0  -1  -2  -1   4
Thr T     0  -1   0  -1  -1  -1  -1  -2  -2  -1  -1  -1  -1  -2  -1   1   5
Trp W    -3  -3  -4  -4  -2  -2  -3  -2  -2  -3  -2  -3  -1   1  -4  -3  -2   11
Tyr Y    -2  -2  -2  -3  -2  -1  -2  -3   2  -1  -1  -2  -1   3  -3  -2  -2   2   7
Val V     0  -3  -3  -3  -1  -2  -2  -3  -3   3   1  -2   1  -1  -2  -2   0  -3  -1   4
         
          A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V
         Ala Arg Asn Asp Cys Gln Glu Gly His Ile Leu Lys Met Phe Pro Ser Thr Trp Tyr Val
     

Classification physico-chimique

Acide aminé Abrév. Chaine lattérale Hydro- phobe Polarisé Chargé petit très petit Aromatique ou Aliphatique van der Waals volume Codon Occurrence (%)
Alanine Ala, A -CH3 X - - X X - 67 GCU, GCC, GCA, GCG 7.8
Cysteine Cys, C -CH2SH X - - X - - 86 UGU, UGC 1.9
Aspartate Asp, D -CH2COOH - X negative X - - 91 GAU, GAC 5.3
Glutamate Glu, E -CH2CH2COOH - X negative - - - 109 GAA, GAG 6.3
Phenylalanine Phe, F -CH2C6H5 X - - - - Aromatic 135 UUU, UUC 3.9
Glycine Gly, G -H X - - X X - 48 GGU, GGC, GGA, GGG 7.2
Histidine His, H -CH2-C3H3N2 - X positive - - Aromatic 118 CAU, CAC 2.3
Isoleucine Ile, I -CH(CH3)CH2CH3 X - - - - Aliphatic 124 AUU, AUC, AUA 5.3
Lysine Lys, K -(CH2)4NH2 - X positive - - - 135 AAA, AAG 5.9
Leucine Leu, L -CH2CH(CH3)2 X - - - - Aliphatic 124 UUA, UUG, CUU, CUC, CUA, CUG 9.1
Methionine Met, M -CH2CH2SCH3 X - - - - - 124 AUG 2.3
Asparagine Asn, N -CH2CONH2 - X - X - - 96 AAU, AAC 4.3
Proline Pro, P -CH2CH2CH2- X - - X - - 90 CCU, CCC, CCA, CCG 5.2
Glutamine Gln, Q -CH2CH2CONH2 - X - - - - 114 CAA, CAG 4.2
Arginine Arg, R -(CH2)3NH-C(NH)NH2 - X positive - - - 148 CGU, CGC, CGA, CGG, AGA, AGG 5.1
Serine Ser, S -CH2OH - X - X X - 73 UCU, UCC, UCA, UCG, AGU,AGC 6.8
Threonine Thr, T -CH(OH)CH3 X X - X - - 93 ACU, ACC, ACA, ACG 5.9
Valine Val, V -CH(CH3)2 X - - X - Aliphatic 105 GUU, GUC, GUA, GUG 6.6
Tryptophan Trp, W -CH2C8H5N X - - - - Aromatic 163 UGG 1.4
Tyrosine Tyr, Y -CH2-C6H4OH X X - - - Aromatic 141 UAU, UAC 3.2

Source : wikipedia